Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH11P55287 MTND4LP10-201ENST00000435146 291 ntBASIC3.34□□□□□ -1.87
CDH11P55287 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH11P55287 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH11P55287 AC092641.1-201ENST00000440229 772 ntBASIC3.34□□□□□ -1.87
CDH11P55287 PGBD4P3-201ENST00000440731 581 ntBASIC3.34□□□□□ -1.87
CDH11P55287 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH11P55287 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.34□□□□□ -1.87
CDH11P55287 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH11P55287 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
CDH11P55287 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH11P55287 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH11P55287 AC021382.1-201ENST00000483523 359 ntBASIC3.34□□□□□ -1.87
CDH11P55287 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH11P55287 HMGN1P11-201ENST00000508668 303 ntBASIC3.34□□□□□ -1.87
CDH11P55287 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH11P55287 ARL2BPP6-201ENST00000512757 439 ntBASIC3.34□□□□□ -1.87
CDH11P55287 MTND3P5-201ENST00000512798 333 ntBASIC3.34□□□□□ -1.87
CDH11P55287 AC116347.2-201ENST00000514912 523 ntBASIC3.34□□□□□ -1.87
CDH11P55287 Vault.1-201ENST00000516474 102 ntBASIC3.34□□□□□ -1.87
CDH11P55287 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.34□□□□□ -1.87
CDH11P55287 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH11P55287 MIR4425-201ENST00000580572 84 ntBASIC3.34□□□□□ -1.87
CDH11P55287 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH11P55287 AC008739.3-201ENST00000603262 127 ntBASIC3.34□□□□□ -1.87
CDH11P55287 AC006254.3-201ENST00000603353 884 ntBASIC3.34□□□□□ -1.87
CDH11P55287 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.34□□□□□ -1.87
CDH11P55287 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH11P55287 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH11P55287 AC099654.13-201ENST00000639774 207 ntBASIC3.34□□□□□ -1.87
CDH11P55287 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH11P55287 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDH11P55287 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH11P55287 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CDH11P55287 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CDH11P55287 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDH11P55287 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH11P55287 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH11P55287 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CDH11P55287 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
CDH11P55287 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH11P55287 Y_RNA.46-201ENST00000362695 102 ntBASIC3.33□□□□□ -1.88
CDH11P55287 RNA5SP235-201ENST00000365411 114 ntBASIC3.33□□□□□ -1.88
CDH11P55287 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH11P55287 RNU6-809P-201ENST00000384461 107 ntBASIC3.33□□□□□ -1.88
CDH11P55287 RNU6-297P-201ENST00000384636 107 ntBASIC3.33□□□□□ -1.88
CDH11P55287 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CDH11P55287 RNA5SP171-201ENST00000391071 115 ntBASIC3.33□□□□□ -1.88
CDH11P55287 DEFB108C-201ENST00000400154 252 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AL136116.1-201ENST00000403591 381 ntBASIC3.33□□□□□ -1.88
CDH11P55287 RPL7P25-201ENST00000404151 721 ntBASIC3.33□□□□□ -1.88
CDH11P55287 Y_RNA.608-201ENST00000410647 95 ntBASIC3.33□□□□□ -1.88
CDH11P55287 RNU6-248P-201ENST00000410720 107 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
CDH11P55287 DLGAP5P1-201ENST00000430307 464 ntBASIC3.33□□□□□ -1.88
CDH11P55287 MTCO3P5-201ENST00000433620 714 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AC108734.1-201ENST00000439549 399 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AL022238.1-201ENST00000442557 355 ntBASIC3.33□□□□□ -1.88
CDH11P55287 SNORD42A-201ENST00000459584 64 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AC091153.1-201ENST00000466297 402 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AC078785.3-201ENST00000476607 425 ntBASIC3.33□□□□□ -1.88
CDH11P55287 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.33□□□□□ -1.88
CDH11P55287 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH11P55287 HMGB1P22-201ENST00000505315 124 ntBASIC3.33□□□□□ -1.88
CDH11P55287 ARL2BPP4-201ENST00000506854 471 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH11P55287 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH11P55287 AF131216.2-201ENST00000512316 564 ntBASIC3.33□□□□□ -1.88
CDH11P55287 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH11P55287 RNU6-1095P-201ENST00000516148 108 ntBASIC3.33□□□□□ -1.88
CDH11P55287 RN7SKP60-201ENST00000516985 239 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH11P55287 AC022878.1-201ENST00000530684 149 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH11P55287 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.33□□□□□ -1.88
CDH11P55287 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH11P55287 ZNF519P3-201ENST00000557158 1032 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AC005771.1-201ENST00000585581 349 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH11P55287 AC100793.4-201ENST00000613683 429 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AC010678.1-201ENST00000614118 713 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AL590099.1-201ENST00000615276 138 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH11P55287 MIR6075-201ENST00000620782 95 ntBASIC3.33□□□□□ -1.88
CDH11P55287 AC012442.3-202ENST00000636742 206 ntBASIC3.33□□□□□ -1.88
CDH11P55287 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH11P55287 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
CDH11P55287 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH11P55287 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH11P55287 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDH11P55287 RNU6-533P-201ENST00000384144 107 ntBASIC3.32□□□□□ -1.88
CDH11P55287 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH11P55287 RN7SKP285-201ENST00000410137 318 ntBASIC3.32□□□□□ -1.88
CDH11P55287 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.32□□□□□ -1.88
CDH11P55287 TOMM22P1-201ENST00000418578 312 ntBASIC3.32□□□□□ -1.88
CDH11P55287 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDH11P55287 BX890604.2-201ENST00000427883 474 ntBASIC3.32□□□□□ -1.88
CDH11P55287 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.32□□□□□ -1.88
CDH11P55287 AL358232.1-201ENST00000448030 501 ntBASIC3.32□□□□□ -1.88
CDH11P55287 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms