Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.22□□□□□ -1.89
HMGCS2P54868 RPL21P134-201ENST00000453468 483 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGCS2P54868 AC034244.1-201ENST00000507687 207 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 AC117522.3-201ENST00000507974 584 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 AC079395.1-201ENST00000510981 262 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 SNORA31.21-201ENST00000517180 77 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 RNU6-1073P-201ENST00000517182 106 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGCS2P54868 AP001189.2-201ENST00000527320 189 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGCS2P54868 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGCS2P54868 AC090502.2-201ENST00000549267 280 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 MTCYBP27-201ENST00000555160 670 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGCS2P54868 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.22□□□□□ -1.89
HMGCS2P54868 AC245036.5-201ENST00000596330 847 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 VN1R78P-201ENST00000597393 564 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 AC011468.4-201ENST00000603942 409 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 AP001521.1-201ENST00000609150 300 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 AC109809.1-201ENST00000619665 545 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.22□□□□□ -1.89
HMGCS2P54868 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS2P54868 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HMGCS2P54868 ZNF734P-201ENST00000419494 1534 ntBASIC3.22□□□□□ -1.89
HMGCS2P54868 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
HMGCS2P54868 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.21□□□□□ -1.89
HMGCS2P54868 AP000776.1-201ENST00000530032 1663 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 RNU6-621P-201ENST00000364752 109 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 SNORA46-201ENST00000384762 135 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 RSL24D1P4-201ENST00000400938 484 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGCS2P54868 VPS26BP1-201ENST00000417155 755 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AL513328.1-201ENST00000446460 224 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 MTCO2P25-201ENST00000447065 681 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS2P54868 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AC098862.1-201ENST00000504991 413 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS2P54868 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS2P54868 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AC104057.1-201ENST00000515547 497 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 RNU5A-4P-201ENST00000516588 111 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AP003385.6-201ENST00000531603 374 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 AC109635.4-202ENST00000531666 412 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS2P54868 AC007954.1-201ENST00000554198 494 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGCS2P54868 SULT1C2P1-202ENST00000562418 459 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 AC131235.4-201ENST00000609288 620 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 XIST_intron.1-201ENST00000619444 68 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 AP002782.1-201ENST00000623107 614 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 AC097520.1-201ENST00000624435 385 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 AC120349.2-201ENST00000625002 298 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.21□□□□□ -1.9
HMGCS2P54868 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
HMGCS2P54868 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS2P54868 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
HMGCS2P54868 AC092593.1-201ENST00000515413 1815 ntBASIC3.21□□□□□ -1.9
HMGCS2P54868 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HMGCS2P54868 AC107982.1-201ENST00000507171 1300 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HMGCS2P54868 RNU6-216P-201ENST00000363282 104 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 RNU6-1214P-201ENST00000363650 109 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 RNU6-374P-201ENST00000364146 108 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 RNU6-157P-201ENST00000383957 107 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 MIR512-1-201ENST00000384913 84 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS2P54868 AC096632.1-201ENST00000427395 310 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS2P54868 MTND1P32-201ENST00000433043 938 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS2P54868 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.2□□□□□ -1.9
HMGCS2P54868 RPL7P36-201ENST00000444633 681 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS2P54868 AC104073.1-201ENST00000451988 151 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGCS2P54868 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS2P54868 RPS3P1-201ENST00000456781 192 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 MTCO3P2-201ENST00000457365 171 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.2□□□□□ -1.9
HMGCS2P54868 TRBV12-1-201ENST00000479785 344 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AL049830.2-201ENST00000480072 201 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AC013828.1-201ENST00000481845 158 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AC021146.5-201ENST00000503544 545 ntBASIC3.2□□□□□ -1.9
HMGCS2P54868 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGCS2P54868 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.2□□□□□ -1.9
HMGCS2P54868 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS2P54868 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.2□□□□□ -1.9
HMGCS2P54868 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.2□□□□□ -1.9
HMGCS2P54868 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms