Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.47□□□□□ -1.69
ATXN1P54253 AL157831.1-201ENST00000426134 473 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.47□□□□□ -1.69
ATXN1P54253 AL356276.2-201ENST00000435919 558 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 RPS29P7-201ENST00000439662 171 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 AL133547.1-201ENST00000448546 220 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 AL162151.2-201ENST00000448875 158 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 ABCF2P2-201ENST00000450549 296 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.47□□□□□ -1.69
ATXN1P54253 snoU109.1-201ENST00000459339 135 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 LARP1BP2-201ENST00000486594 519 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.47□□□□□ -1.69
ATXN1P54253 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.47□□□□□ -1.69
ATXN1P54253 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.47□□□□□ -1.69
ATXN1P54253 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 RNA5SP519-201ENST00000516480 119 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 AC104986.1-201ENST00000517978 436 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 TRMT10BP1-201ENST00000519377 943 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 OR5M7P-201ENST00000526140 972 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 LARP7P2-201ENST00000575306 125 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 MIR4307-201ENST00000582802 84 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.47□□□□□ -1.69
ATXN1P54253 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.47□□□□□ -1.69
ATXN1P54253 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.47□□□□□ -1.69
ATXN1P54253 MIR6867-201ENST00000610636 67 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 AC008250.2-201ENST00000615261 205 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 AC108479.2-201ENST00000617314 601 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 7SK.10-201ENST00000621414 298 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 C2orf27A-204ENST00000623058 969 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.47□□□□□ -1.69
ATXN1P54253 AC012442.3-202ENST00000636742 206 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
ATXN1P54253 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATXN1P54253 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATXN1P54253 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.47□□□□□ -1.69
ATXN1P54253 AC090337.1-201ENST00000579651 2074 ntBASIC4.47□□□□□ -1.69
ATXN1P54253 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATXN1P54253 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.46□□□□□ -1.69
ATXN1P54253 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATXN1P54253 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATXN1P54253 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
ATXN1P54253 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
ATXN1P54253 AC018529.3-201ENST00000624212 2254 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
ATXN1P54253 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ATXN1P54253 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.46□□□□□ -1.7
ATXN1P54253 SNORA51.6-201ENST00000384151 125 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 RNU6-809P-201ENST00000384461 107 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 Y_RNA.582-201ENST00000391023 95 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ATXN1P54253 DHFRP6-201ENST00000401776 268 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 RN7SKP235-201ENST00000410662 305 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 HMGB3P23-201ENST00000414981 585 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.46□□□□□ -1.7
ATXN1P54253 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.46□□□□□ -1.7
ATXN1P54253 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.46□□□□□ -1.7
ATXN1P54253 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.46□□□□□ -1.7
ATXN1P54253 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.46□□□□□ -1.7
ATXN1P54253 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.46□□□□□ -1.7
ATXN1P54253 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.46□□□□□ -1.7
ATXN1P54253 RPS20P32-201ENST00000456044 356 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 PMCHL2-203ENST00000457791 237 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 RNU6-1208P-201ENST00000459588 107 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 AC104164.2-201ENST00000496953 495 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 AL358832.1-201ENST00000497800 389 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
ATXN1P54253 RNA5SP49-201ENST00000516450 115 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 RN7SKP116-201ENST00000516902 319 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 AC008694.2-201ENST00000517591 306 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.46□□□□□ -1.7
ATXN1P54253 DNAJC8P1-201ENST00000554535 372 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.46□□□□□ -1.7
ATXN1P54253 SRGNP1-201ENST00000603392 451 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 HMGN2P28-201ENST00000606102 262 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 MIR8059-201ENST00000620427 81 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 YWHAEP7-203ENST00000622054 312 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.46□□□□□ -1.7
ATXN1P54253 AC130650.2-201ENST00000618736 2403 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATXN1P54253 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATXN1P54253 AL022578.1-201ENST00000439330 1433 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 OR11H5P-202ENST00000641612 1325 ntBASIC4.46□□□□□ -1.7
ATXN1P54253 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
ATXN1P54253 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
ATXN1P54253 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
ATXN1P54253 SCN1A-220ENST00000641603 12506 ntBASIC4.45□□□□□ -1.7
ATXN1P54253 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
ATXN1P54253 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
ATXN1P54253 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.45□□□□□ -1.7
ATXN1P54253 LARP1BP1-201ENST00000506036 1359 ntBASIC4.45□□□□□ -1.7
ATXN1P54253 RPL23AP57-201ENST00000332361 466 ntBASIC4.45□□□□□ -1.7
ATXN1P54253 Y_RNA.133-201ENST00000363428 110 ntBASIC4.45□□□□□ -1.7
ATXN1P54253 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.45□□□□□ -1.7
ATXN1P54253 RNU6-533P-201ENST00000384144 107 ntBASIC4.45□□□□□ -1.7
ATXN1P54253 ARF4P3-201ENST00000397387 509 ntBASIC4.45□□□□□ -1.7
ATXN1P54253 CIR1P3-201ENST00000405137 479 ntBASIC4.45□□□□□ -1.7
ATXN1P54253 MIR1305-201ENST00000408300 86 ntBASIC4.45□□□□□ -1.7
ATXN1P54253 RNU6-248P-201ENST00000410720 107 ntBASIC4.45□□□□□ -1.7
ATXN1P54253 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms