Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-601P-201ENST00000384540 107 ntBASIC5.36□□□□□ -1.55
USP11P51784 MIR1271-201ENST00000408537 86 ntBASIC5.36□□□□□ -1.55
USP11P51784 RNU2-36P-201ENST00000410361 191 ntBASIC5.36□□□□□ -1.55
USP11P51784 RNU4-61P-201ENST00000411243 107 ntBASIC5.36□□□□□ -1.55
USP11P51784 AC140479.3-201ENST00000418944 1126 ntBASIC5.36□□□□□ -1.55
USP11P51784 AL358176.3-201ENST00000420757 454 ntBASIC5.36□□□□□ -1.55
USP11P51784 AL139396.1-201ENST00000421137 167 ntBASIC5.36□□□□□ -1.55
USP11P51784 RPL36AP10-201ENST00000421785 322 ntBASIC5.36□□□□□ -1.55
USP11P51784 OR2AS1P-201ENST00000427827 319 ntBASIC5.36□□□□□ -1.55
USP11P51784 AL031584.1-201ENST00000447169 754 ntBASIC5.36□□□□□ -1.55
USP11P51784 AC010326.1-201ENST00000462726 602 ntBASIC5.36□□□□□ -1.55
USP11P51784 AL591473.1-201ENST00000464297 313 ntBASIC5.36□□□□□ -1.55
USP11P51784 AC108043.1-201ENST00000512696 574 ntBASIC5.36□□□□□ -1.55
USP11P51784 RNU6-635P-201ENST00000516651 102 ntBASIC5.36□□□□□ -1.55
USP11P51784 RNA5SP503-201ENST00000517047 117 ntBASIC5.36□□□□□ -1.55
USP11P51784 AC009812.2-201ENST00000517657 457 ntBASIC5.36□□□□□ -1.55
USP11P51784 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.36□□□□□ -1.55
USP11P51784 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.36□□□□□ -1.55
USP11P51784 AC053481.3-201ENST00000577881 843 ntBASIC5.36□□□□□ -1.55
USP11P51784 RN7SL690P-201ENST00000582087 240 ntBASIC5.36□□□□□ -1.55
USP11P51784 AC023043.2-201ENST00000589678 1026 ntBASIC5.36□□□□□ -1.55
USP11P51784 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.36□□□□□ -1.55
USP11P51784 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.36□□□□□ -1.55
USP11P51784 DUSP12P1-201ENST00000612874 516 ntBASIC5.36□□□□□ -1.55
USP11P51784 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.36□□□□□ -1.55
USP11P51784 AC244100.1-202ENST00000621554 382 ntBASIC5.36□□□□□ -1.55
USP11P51784 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.36□□□□□ -1.55
USP11P51784 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP11P51784 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP11P51784 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
USP11P51784 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP11P51784 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP11P51784 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
USP11P51784 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
USP11P51784 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP11P51784 SMG1P4-204ENST00000523028 4131 ntBASIC5.35□□□□□ -1.55
USP11P51784 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP11P51784 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
USP11P51784 CDC27P3-201ENST00000635418 1910 ntBASIC5.35□□□□□ -1.55
USP11P51784 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
USP11P51784 AL445487.1-201ENST00000415694 1580 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC104118.1-201ENST00000607625 1589 ntBASIC5.35□□□□□ -1.55
USP11P51784 RNU6-238P-201ENST00000363313 106 ntBASIC5.35□□□□□ -1.55
USP11P51784 RNU6-97P-201ENST00000363387 104 ntBASIC5.35□□□□□ -1.55
USP11P51784 RNU6-511P-201ENST00000363496 107 ntBASIC5.35□□□□□ -1.55
USP11P51784 RN7SKP224-201ENST00000364140 325 ntBASIC5.35□□□□□ -1.55
USP11P51784 Y_RNA.252-201ENST00000364556 101 ntBASIC5.35□□□□□ -1.55
USP11P51784 SOD2P1-201ENST00000396543 562 ntBASIC5.35□□□□□ -1.55
USP11P51784 MIR548I3-201ENST00000408378 149 ntBASIC5.35□□□□□ -1.55
USP11P51784 MIR548I1-201ENST00000408810 149 ntBASIC5.35□□□□□ -1.55
USP11P51784 GSTM3P2-201ENST00000412746 530 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.35□□□□□ -1.55
USP11P51784 RPL6P29-201ENST00000414863 865 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC068533.1-201ENST00000418542 415 ntBASIC5.35□□□□□ -1.55
USP11P51784 RAC1P6-201ENST00000423911 575 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.35□□□□□ -1.55
USP11P51784 RPS24P13-201ENST00000442520 397 ntBASIC5.35□□□□□ -1.55
USP11P51784 RPL21P133-201ENST00000443666 476 ntBASIC5.35□□□□□ -1.55
USP11P51784 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.35□□□□□ -1.55
USP11P51784 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.35□□□□□ -1.55
USP11P51784 RNA5SP103-201ENST00000459503 118 ntBASIC5.35□□□□□ -1.55
USP11P51784 AP001992.1-205ENST00000462248 379 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC006511.1-201ENST00000470614 315 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC128713.1-201ENST00000471495 306 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC021382.1-201ENST00000483523 359 ntBASIC5.35□□□□□ -1.55
USP11P51784 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
USP11P51784 AC110794.1-201ENST00000505816 425 ntBASIC5.35□□□□□ -1.55
USP11P51784 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
USP11P51784 AC097473.1-201ENST00000508142 408 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.35□□□□□ -1.55
USP11P51784 SETP2-201ENST00000553886 926 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC105129.1-201ENST00000560250 297 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC138761.3-201ENST00000579993 334 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.35□□□□□ -1.55
USP11P51784 AC005357.1-201ENST00000588399 301 ntBASIC5.35□□□□□ -1.55
USP11P51784 AC104695.3-201ENST00000604052 296 ntBASIC5.35□□□□□ -1.55
USP11P51784 PRR13P7-201ENST00000605538 430 ntBASIC5.35□□□□□ -1.55
USP11P51784 AL161616.1-201ENST00000611867 286 ntBASIC5.35□□□□□ -1.55
USP11P51784 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.35□□□□□ -1.55
USP11P51784 AL732372.2-225ENST00000642124 456 ntBASIC5.35□□□□□ -1.55
USP11P51784 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP11P51784 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP11P51784 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USP11P51784 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
USP11P51784 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.35□□□□□ -1.55
USP11P51784 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.35□□□□□ -1.55
USP11P51784 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
USP11P51784 OR51H2P-202ENST00000641424 3046 ntBASIC5.34□□□□□ -1.55
USP11P51784 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
USP11P51784 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP11P51784 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP11P51784 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP11P51784 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
USP11P51784 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP11P51784 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
USP11P51784 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.34□□□□□ -1.55
USP11P51784 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
USP11P51784 AC079741.1-201ENST00000321498 212 ntBASIC5.34□□□□□ -1.55
USP11P51784 RNA5SP258-201ENST00000362750 119 ntBASIC5.34□□□□□ -1.55
USP11P51784 Y_RNA.257-201ENST00000364596 102 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms