Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 AL445264.1-201ENST00000621719 171 ntBASIC4.06□□□□□ -1.76
CTCFP49711 AC068057.2-201ENST00000624047 895 ntBASIC4.06□□□□□ -1.76
CTCFP49711 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTCFP49711 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CTCFP49711 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTCFP49711 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTCFP49711 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.05□□□□□ -1.76
CTCFP49711 AL356473.1-201ENST00000406203 1408 ntBASIC4.05□□□□□ -1.76
CTCFP49711 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTCFP49711 RNU6-777P-201ENST00000364265 104 ntBASIC4.05□□□□□ -1.76
CTCFP49711 RNU6-253P-201ENST00000384730 105 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AL138880.1-201ENST00000405824 642 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AL583834.1-201ENST00000406943 343 ntBASIC4.05□□□□□ -1.76
CTCFP49711 RNA5SP508-201ENST00000411327 119 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AL513174.1-201ENST00000423182 629 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AL365203.2-201ENST00000423444 196 ntBASIC4.05□□□□□ -1.76
CTCFP49711 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.05□□□□□ -1.76
CTCFP49711 AC234781.2-201ENST00000426370 994 ntBASIC4.05□□□□□ -1.76
CTCFP49711 MUPP-201ENST00000438111 566 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.05□□□□□ -1.76
CTCFP49711 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.05□□□□□ -1.76
CTCFP49711 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.05□□□□□ -1.76
CTCFP49711 BX322784.1-201ENST00000455793 1077 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.05□□□□□ -1.76
CTCFP49711 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.05□□□□□ -1.76
CTCFP49711 RNA5SP216-201ENST00000516111 123 ntBASIC4.05□□□□□ -1.76
CTCFP49711 RNU6-232P-201ENST00000517144 64 ntBASIC4.05□□□□□ -1.76
CTCFP49711 COX6CP8-201ENST00000522620 226 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.05□□□□□ -1.76
CTCFP49711 OSBPL9P5-201ENST00000542581 171 ntBASIC4.05□□□□□ -1.76
CTCFP49711 EEF1B2P4-201ENST00000551398 348 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AC090888.1-201ENST00000561335 1141 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AC135628.1-201ENST00000568867 534 ntBASIC4.05□□□□□ -1.76
CTCFP49711 MIR3690-201ENST00000580266 75 ntBASIC4.05□□□□□ -1.76
CTCFP49711 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.05□□□□□ -1.76
CTCFP49711 ATP5A1P2-202ENST00000616464 443 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AC009159.1-201ENST00000618386 642 ntBASIC4.05□□□□□ -1.76
CTCFP49711 AL603755.1-201ENST00000619504 163 ntBASIC4.05□□□□□ -1.76
CTCFP49711 U4.6-201ENST00000621618 127 ntBASIC4.05□□□□□ -1.76
CTCFP49711 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTCFP49711 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTCFP49711 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTCFP49711 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.04□□□□□ -1.76
CTCFP49711 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CTCFP49711 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTCFP49711 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTCFP49711 Y_RNA.238-201ENST00000364441 102 ntBASIC4.04□□□□□ -1.76
CTCFP49711 Y_RNA.302-201ENST00000364997 102 ntBASIC4.04□□□□□ -1.76
CTCFP49711 RNU6-1181P-201ENST00000384191 106 ntBASIC4.04□□□□□ -1.76
CTCFP49711 SNORD51-201ENST00000384320 80 ntBASIC4.04□□□□□ -1.76
CTCFP49711 SNORD116-8-201ENST00000384365 95 ntBASIC4.04□□□□□ -1.76
CTCFP49711 RNY3P9-201ENST00000384727 106 ntBASIC4.04□□□□□ -1.76
CTCFP49711 HMGN2P8-201ENST00000391458 268 ntBASIC4.04□□□□□ -1.76
CTCFP49711 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.04□□□□□ -1.76
CTCFP49711 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.04□□□□□ -1.76
CTCFP49711 MTATP6P27-201ENST00000416987 621 ntBASIC4.04□□□□□ -1.76
CTCFP49711 MTCO2P5-201ENST00000422621 426 ntBASIC4.04□□□□□ -1.76
CTCFP49711 AC019178.2-201ENST00000423595 505 ntBASIC4.04□□□□□ -1.76
CTCFP49711 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.04□□□□□ -1.76
CTCFP49711 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.04□□□□□ -1.76
CTCFP49711 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.04□□□□□ -1.76
CTCFP49711 AL445567.1-201ENST00000439121 144 ntBASIC4.04□□□□□ -1.76
CTCFP49711 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.04□□□□□ -1.76
CTCFP49711 RPS17P13-201ENST00000448974 407 ntBASIC4.04□□□□□ -1.76
CTCFP49711 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.04□□□□□ -1.76
CTCFP49711 RPS24P6-201ENST00000452670 400 ntBASIC4.04□□□□□ -1.76
CTCFP49711 AL049830.2-201ENST00000480072 201 ntBASIC4.04□□□□□ -1.76
CTCFP49711 RPL7P47-201ENST00000497299 556 ntBASIC4.04□□□□□ -1.76
CTCFP49711 AC112198.1-201ENST00000505369 1220 ntBASIC4.04□□□□□ -1.76
CTCFP49711 AC010625.1-201ENST00000511296 403 ntBASIC4.04□□□□□ -1.76
CTCFP49711 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.04□□□□□ -1.76
CTCFP49711 AP004371.1-201ENST00000525240 214 ntBASIC4.04□□□□□ -1.76
CTCFP49711 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.04□□□□□ -1.76
CTCFP49711 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.04□□□□□ -1.76
CTCFP49711 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.04□□□□□ -1.76
CTCFP49711 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.04□□□□□ -1.76
CTCFP49711 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
CTCFP49711 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.04□□□□□ -1.76
CTCFP49711 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.04□□□□□ -1.76
CTCFP49711 NRBF2P5-201ENST00000603087 788 ntBASIC4.04□□□□□ -1.76
CTCFP49711 AL390208.1-201ENST00000605885 644 ntBASIC4.04□□□□□ -1.76
CTCFP49711 RNU6-88P-201ENST00000606801 100 ntBASIC4.04□□□□□ -1.76
CTCFP49711 VIS1.1-201ENST00000610517 203 ntBASIC4.04□□□□□ -1.76
CTCFP49711 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTCFP49711 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTCFP49711 AP001350.1-201ENST00000601906 1524 ntBASIC4.04□□□□□ -1.76
CTCFP49711 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CTCFP49711 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.04□□□□□ -1.76
CTCFP49711 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CTCFP49711 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.03□□□□□ -1.76
CTCFP49711 Y_RNA.18-201ENST00000362461 102 ntBASIC4.03□□□□□ -1.76
CTCFP49711 RNA5SP88-201ENST00000365560 109 ntBASIC4.03□□□□□ -1.76
CTCFP49711 RNU6-723P-201ENST00000383973 107 ntBASIC4.03□□□□□ -1.76
CTCFP49711 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.03□□□□□ -1.76
CTCFP49711 AC083875.1-201ENST00000419509 405 ntBASIC4.03□□□□□ -1.76
CTCFP49711 SNRPEP7-201ENST00000438350 220 ntBASIC4.03□□□□□ -1.76
CTCFP49711 AC002381.1-201ENST00000447049 280 ntBASIC4.03□□□□□ -1.76
CTCFP49711 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.03□□□□□ -1.76
CTCFP49711 MTCO1P27-201ENST00000448269 226 ntBASIC4.03□□□□□ -1.76
CTCFP49711 snoU109.4-201ENST00000458953 143 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms