Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AL139286.1-201ENST00000604465 483 ntBASIC1.73□□□□□ -2.13
CENPFP49454 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CENPFP49454 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CENPFP49454 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC1.73□□□□□ -2.13
CENPFP49454 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CENPFP49454 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
CENPFP49454 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.72□□□□□ -2.13
CENPFP49454 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.72□□□□□ -2.13
CENPFP49454 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.72□□□□□ -2.13
CENPFP49454 RPL21P2-201ENST00000440049 481 ntBASIC1.72□□□□□ -2.13
CENPFP49454 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CENPFP49454 AC087854.1-201ENST00000519706 414 ntBASIC1.72□□□□□ -2.13
CENPFP49454 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.72□□□□□ -2.13
CENPFP49454 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.72□□□□□ -2.13
CENPFP49454 MIR4419B-201ENST00000577260 68 ntBASIC1.72□□□□□ -2.13
CENPFP49454 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CENPFP49454 IPMKP1-201ENST00000425988 855 ntBASIC1.72□□□□□ -2.13
CENPFP49454 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.72□□□□□ -2.13
CENPFP49454 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.72□□□□□ -2.13
CENPFP49454 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CENPFP49454 SNORA26.7-201ENST00000391288 122 ntBASIC1.72□□□□□ -2.13
CENPFP49454 AC027673.1-201ENST00000456245 405 ntBASIC1.72□□□□□ -2.13
CENPFP49454 RNA5SP337-201ENST00000517007 109 ntBASIC1.72□□□□□ -2.13
CENPFP49454 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC1.72□□□□□ -2.13
CENPFP49454 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.72□□□□□ -2.13
CENPFP49454 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.72□□□□□ -2.13
CENPFP49454 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
CENPFP49454 NUP58P1-201ENST00000502546 1738 ntBASIC1.72□□□□□ -2.13
CENPFP49454 WWP1P1-201ENST00000466609 2769 ntBASIC1.71□□□□□ -2.13
CENPFP49454 AC012321.1-201ENST00000561622 1588 ntBASIC1.71□□□□□ -2.14
CENPFP49454 RNA5SP62-201ENST00000363457 110 ntBASIC1.71□□□□□ -2.14
CENPFP49454 AL022400.1-201ENST00000423946 935 ntBASIC1.71□□□□□ -2.14
CENPFP49454 AC096720.1-201ENST00000604441 183 ntBASIC1.71□□□□□ -2.14
CENPFP49454 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CENPFP49454 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.71□□□□□ -2.14
CENPFP49454 SNORD48-201ENST00000364953 64 ntBASIC1.71□□□□□ -2.14
CENPFP49454 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CENPFP49454 RNA5SP181-201ENST00000410246 98 ntBASIC1.71□□□□□ -2.14
CENPFP49454 RN7SKP101-201ENST00000411376 320 ntBASIC1.71□□□□□ -2.14
CENPFP49454 AC019176.1-201ENST00000518519 225 ntBASIC1.71□□□□□ -2.14
CENPFP49454 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.71□□□□□ -2.14
CENPFP49454 AC022790.1-201ENST00000522872 204 ntBASIC1.71□□□□□ -2.14
CENPFP49454 AP000907.2-201ENST00000530827 353 ntBASIC1.71□□□□□ -2.14
CENPFP49454 AC068135.2-201ENST00000569293 1028 ntBASIC1.71□□□□□ -2.14
CENPFP49454 AC006254.3-201ENST00000603353 884 ntBASIC1.71□□□□□ -2.14
CENPFP49454 MTCO1P6-201ENST00000481192 1384 ntBASIC1.7□□□□□ -2.14
CENPFP49454 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CENPFP49454 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.7□□□□□ -2.14
CENPFP49454 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CENPFP49454 MTND5P7-201ENST00000413558 1798 ntBASIC1.7□□□□□ -2.14
CENPFP49454 SNORA16.1-201ENST00000364597 132 ntBASIC1.7□□□□□ -2.14
CENPFP49454 RNU6-882P-201ENST00000391025 103 ntBASIC1.7□□□□□ -2.14
CENPFP49454 AC093084.1-201ENST00000424233 687 ntBASIC1.7□□□□□ -2.14
CENPFP49454 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.7□□□□□ -2.14
CENPFP49454 AC108078.1-201ENST00000508073 725 ntBASIC1.7□□□□□ -2.14
CENPFP49454 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC1.7□□□□□ -2.14
CENPFP49454 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CENPFP49454 HMGB3P2-201ENST00000411913 584 ntBASIC1.7□□□□□ -2.14
CENPFP49454 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.7□□□□□ -2.14
CENPFP49454 FTH1P12-201ENST00000432137 551 ntBASIC1.7□□□□□ -2.14
CENPFP49454 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CENPFP49454 AC079203.1-201ENST00000487972 404 ntBASIC1.7□□□□□ -2.14
CENPFP49454 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CENPFP49454 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.7□□□□□ -2.14
CENPFP49454 AC068944.2-201ENST00000610373 403 ntBASIC1.7□□□□□ -2.14
CENPFP49454 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CENPFP49454 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.69□□□□□ -2.14
CENPFP49454 AF274854.1-201ENST00000413236 615 ntBASIC1.69□□□□□ -2.14
CENPFP49454 AC023128.2-201ENST00000420880 1223 ntBASIC1.69□□□□□ -2.14
CENPFP49454 AC024614.2-201ENST00000577584 372 ntBASIC1.69□□□□□ -2.14
CENPFP49454 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
CENPFP49454 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.69□□□□□ -2.14
CENPFP49454 AC090453.1-201ENST00000495560 436 ntBASIC1.69□□□□□ -2.14
CENPFP49454 AC084851.1-201ENST00000529105 249 ntBASIC1.69□□□□□ -2.14
CENPFP49454 TRAV28-201ENST00000557548 323 ntBASIC1.69□□□□□ -2.14
CENPFP49454 MIR3670-2-201ENST00000582974 65 ntBASIC1.69□□□□□ -2.14
CENPFP49454 MIR3670-1-201ENST00000584160 65 ntBASIC1.69□□□□□ -2.14
CENPFP49454 MIR3670-3-201ENST00000584855 65 ntBASIC1.69□□□□□ -2.14
CENPFP49454 MIR3670-4-201ENST00000612260 65 ntBASIC1.69□□□□□ -2.14
CENPFP49454 FNDC3CP-201ENST00000420795 1155 ntBASIC1.68□□□□□ -2.14
CENPFP49454 AL513185.2-201ENST00000425543 193 ntBASIC1.68□□□□□ -2.14
CENPFP49454 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.68□□□□□ -2.14
CENPFP49454 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.68□□□□□ -2.14
CENPFP49454 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.68□□□□□ -2.14
CENPFP49454 AC012640.5-201ENST00000623897 319 ntBASIC1.68□□□□□ -2.14
CENPFP49454 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CENPFP49454 MIRLET7G-201ENST00000362280 84 ntBASIC1.68□□□□□ -2.14
CENPFP49454 RNU4-41P-201ENST00000364426 143 ntBASIC1.68□□□□□ -2.14
CENPFP49454 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
CENPFP49454 EIF2S2P4-201ENST00000461070 984 ntBASIC1.68□□□□□ -2.14
CENPFP49454 AC008121.3-201ENST00000618726 433 ntBASIC1.68□□□□□ -2.14
CENPFP49454 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.68□□□□□ -2.14
CENPFP49454 Y_RNA.115-201ENST00000363272 98 ntBASIC1.68□□□□□ -2.14
CENPFP49454 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.68□□□□□ -2.14
CENPFP49454 AL589765.3-201ENST00000446084 462 ntBASIC1.68□□□□□ -2.14
CENPFP49454 AP002345.1-201ENST00000456493 928 ntBASIC1.68□□□□□ -2.14
CENPFP49454 RPS3AP22-201ENST00000488297 769 ntBASIC1.68□□□□□ -2.14
CENPFP49454 FABP5P6-201ENST00000510588 409 ntBASIC1.68□□□□□ -2.14
CENPFP49454 RNU6-826P-201ENST00000516827 104 ntBASIC1.68□□□□□ -2.14
CENPFP49454 AF186190.1-201ENST00000517470 480 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms