Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RNU6-1257P-201ENST00000384625 110 ntBASIC2.55□□□□□ -2
CXCL12P48061 AL138880.1-201ENST00000405824 642 ntBASIC2.55□□□□□ -2
CXCL12P48061 AL583834.1-201ENST00000406943 343 ntBASIC2.55□□□□□ -2
CXCL12P48061 AL023807.1-201ENST00000407932 359 ntBASIC2.55□□□□□ -2
CXCL12P48061 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.55□□□□□ -2
CXCL12P48061 RAP1BP1-201ENST00000412709 553 ntBASIC2.55□□□□□ -2
CXCL12P48061 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.55□□□□□ -2
CXCL12P48061 RPL7P10-201ENST00000417407 739 ntBASIC2.55□□□□□ -2
CXCL12P48061 FNDC3CP-201ENST00000420795 1155 ntBASIC2.55□□□□□ -2
CXCL12P48061 PTP4A1P7-201ENST00000423476 514 ntBASIC2.55□□□□□ -2
CXCL12P48061 RPS6P14-201ENST00000425165 719 ntBASIC2.55□□□□□ -2
CXCL12P48061 AL591806.2-201ENST00000433122 173 ntBASIC2.55□□□□□ -2
CXCL12P48061 PTGES3P1-201ENST00000439531 483 ntBASIC2.55□□□□□ -2
CXCL12P48061 AC011816.1-201ENST00000441346 546 ntBASIC2.55□□□□□ -2
CXCL12P48061 ST13P20-201ENST00000447996 1065 ntBASIC2.55□□□□□ -2
CXCL12P48061 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.55□□□□□ -2
CXCL12P48061 snoU13.3-201ENST00000459441 104 ntBASIC2.55□□□□□ -2
CXCL12P48061 HMGN2P13-201ENST00000476476 274 ntBASIC2.55□□□□□ -2
CXCL12P48061 RN7SL283P-201ENST00000489055 303 ntBASIC2.55□□□□□ -2
CXCL12P48061 RPL23AP55-201ENST00000498163 452 ntBASIC2.55□□□□□ -2
CXCL12P48061 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.55□□□□□ -2
CXCL12P48061 AC068657.1-201ENST00000520807 306 ntBASIC2.55□□□□□ -2
CXCL12P48061 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.55□□□□□ -2
CXCL12P48061 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.55□□□□□ -2
CXCL12P48061 MTCYBP41-201ENST00000528913 1123 ntBASIC2.55□□□□□ -2
CXCL12P48061 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.55□□□□□ -2
CXCL12P48061 AP001317.1-201ENST00000531194 960 ntBASIC2.55□□□□□ -2
CXCL12P48061 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.55□□□□□ -2
CXCL12P48061 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.55□□□□□ -2
CXCL12P48061 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.55□□□□□ -2
CXCL12P48061 MTCO3P24-201ENST00000572729 782 ntBASIC2.55□□□□□ -2
CXCL12P48061 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.55□□□□□ -2
CXCL12P48061 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.55□□□□□ -2
CXCL12P48061 AC006116.7-201ENST00000590141 756 ntBASIC2.55□□□□□ -2
CXCL12P48061 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.55□□□□□ -2
CXCL12P48061 AL109653.1-201ENST00000603091 248 ntBASIC2.55□□□□□ -2
CXCL12P48061 AL445435.1-201ENST00000604232 665 ntBASIC2.55□□□□□ -2
CXCL12P48061 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CXCL12P48061 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CXCL12P48061 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.55□□□□□ -2
CXCL12P48061 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.54□□□□□ -2
CXCL12P48061 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
CXCL12P48061 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.54□□□□□ -2
CXCL12P48061 RNU6-298P-201ENST00000390888 96 ntBASIC2.54□□□□□ -2
CXCL12P48061 TMSB4XP8-201ENST00000402089 135 ntBASIC2.54□□□□□ -2
CXCL12P48061 TMSB4XP6-201ENST00000415187 135 ntBASIC2.54□□□□□ -2
CXCL12P48061 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.54□□□□□ -2
CXCL12P48061 AL451074.5-201ENST00000415894 435 ntBASIC2.54□□□□□ -2
CXCL12P48061 AC092634.6-201ENST00000418558 192 ntBASIC2.54□□□□□ -2
CXCL12P48061 USP9YP21-201ENST00000420603 432 ntBASIC2.54□□□□□ -2
CXCL12P48061 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.54□□□□□ -2
CXCL12P48061 TMSB4XP1-201ENST00000424567 135 ntBASIC2.54□□□□□ -2
CXCL12P48061 MTCO1P39-201ENST00000426148 480 ntBASIC2.54□□□□□ -2
CXCL12P48061 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
CXCL12P48061 VDAC1P3-201ENST00000434069 851 ntBASIC2.54□□□□□ -2
CXCL12P48061 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.54□□□□□ -2
CXCL12P48061 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.54□□□□□ -2
CXCL12P48061 RPL23AP22-201ENST00000437556 453 ntBASIC2.54□□□□□ -2
CXCL12P48061 RPS29P6-201ENST00000438196 145 ntBASIC2.54□□□□□ -2
CXCL12P48061 RPL23AP16-201ENST00000441715 421 ntBASIC2.54□□□□□ -2
CXCL12P48061 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.54□□□□□ -2
CXCL12P48061 RPL7P52-201ENST00000449200 742 ntBASIC2.54□□□□□ -2
CXCL12P48061 TRBV26-201ENST00000456572 344 ntBASIC2.54□□□□□ -2
CXCL12P48061 MTCO3P2-201ENST00000457365 171 ntBASIC2.54□□□□□ -2
CXCL12P48061 AC108210.2-201ENST00000503681 201 ntBASIC2.54□□□□□ -2
CXCL12P48061 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.54□□□□□ -2
CXCL12P48061 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CXCL12P48061 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.54□□□□□ -2
CXCL12P48061 SNORA48.10-201ENST00000516965 160 ntBASIC2.54□□□□□ -2
CXCL12P48061 AC245166.1-201ENST00000521012 253 ntBASIC2.54□□□□□ -2
CXCL12P48061 NDUFS5P6-201ENST00000529136 295 ntBASIC2.54□□□□□ -2
CXCL12P48061 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.54□□□□□ -2
CXCL12P48061 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.54□□□□□ -2
CXCL12P48061 AL592148.2-201ENST00000612210 372 ntBASIC2.54□□□□□ -2
CXCL12P48061 AL512506.2-201ENST00000624472 458 ntBASIC2.54□□□□□ -2
CXCL12P48061 AL138960.2-201ENST00000625145 535 ntBASIC2.54□□□□□ -2
CXCL12P48061 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.54□□□□□ -2
CXCL12P48061 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.54□□□□□ -2
CXCL12P48061 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.53□□□□□ -2
CXCL12P48061 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CXCL12P48061 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.53□□□□□ -2
CXCL12P48061 AC109315.1-201ENST00000584143 1347 ntBASIC2.53□□□□□ -2
CXCL12P48061 HMGB1P5-201ENST00000255320 642 ntBASIC2.53□□□□□ -2
CXCL12P48061 RNU6-707P-201ENST00000364647 95 ntBASIC2.53□□□□□ -2
CXCL12P48061 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.53□□□□□ -2
CXCL12P48061 RNU6-657P-201ENST00000383904 107 ntBASIC2.53□□□□□ -2
CXCL12P48061 RNU6-730P-201ENST00000383954 104 ntBASIC2.53□□□□□ -2
CXCL12P48061 RNU1-73P-201ENST00000383971 164 ntBASIC2.53□□□□□ -2
CXCL12P48061 RNU6-1000P-201ENST00000391066 106 ntBASIC2.53□□□□□ -2
CXCL12P48061 AL121972.1-201ENST00000402023 252 ntBASIC2.53□□□□□ -2
CXCL12P48061 AL355143.1-201ENST00000407101 841 ntBASIC2.53□□□□□ -2
CXCL12P48061 MIR1289-2-201ENST00000408360 111 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.53□□□□□ -2
CXCL12P48061 NANOGP5-201ENST00000424456 877 ntBASIC2.53□□□□□ -2
CXCL12P48061 RAC1P8-201ENST00000427086 527 ntBASIC2.53□□□□□ -2
CXCL12P48061 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.53□□□□□ -2
CXCL12P48061 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC104332.2-201ENST00000429959 156 ntBASIC2.53□□□□□ -2
CXCL12P48061 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.53□□□□□ -2
CXCL12P48061 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms