Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC108059.3-201ENST00000456388 214 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC1P41238 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.42□□□□□ -1.86
APOBEC1P41238 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 BTF3L4P4-201ENST00000506381 449 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AC004062.1-201ENST00000509926 645 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 CDC42P4-201ENST00000510507 563 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 RAC1P2-201ENST00000511164 579 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AC021146.1-201ENST00000511202 716 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.42□□□□□ -1.86
APOBEC1P41238 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC1P41238 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC1P41238 FTH1P9-201ENST00000513251 355 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 RNU2-46P-201ENST00000517038 113 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC1P41238 AP003181.2-201ENST00000528941 181 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.42□□□□□ -1.86
APOBEC1P41238 AP000857.1-201ENST00000532151 543 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AP004242.1-201ENST00000533701 349 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC1P41238 BNIP3P5-201ENST00000562290 498 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 MIR3146-201ENST00000580367 79 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 NRBF2P1-201ENST00000587407 859 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.42□□□□□ -1.86
APOBEC1P41238 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.42□□□□□ -1.86
APOBEC1P41238 VN1R85P-201ENST00000601587 426 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AC078795.2-201ENST00000602835 1252 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 DUXAP4-201ENST00000603046 613 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AC091805.2-201ENST00000603848 235 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 NDUFA8P1-201ENST00000605525 367 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AL451086.1-201ENST00000605596 223 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 BRDTP1-201ENST00000605735 677 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.42□□□□□ -1.86
APOBEC1P41238 AC091304.9-201ENST00000612091 226 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AC024941.1-201ENST00000612250 334 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 Z99129.1-201ENST00000612510 255 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.42□□□□□ -1.86
APOBEC1P41238 AC015540.1-201ENST00000615828 501 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AC068831.8-201ENST00000620171 435 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 AL353748.2-201ENST00000622148 471 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC1P41238 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC1P41238 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC1P41238 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
APOBEC1P41238 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC1P41238 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.42□□□□□ -1.86
APOBEC1P41238 NCAPGP1-201ENST00000505112 1814 ntBASIC3.42□□□□□ -1.86
APOBEC1P41238 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC1P41238 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
APOBEC1P41238 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC1P41238 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC1P41238 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC1P41238 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC1P41238 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC1P41238 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC1P41238 SNORA51.2-201ENST00000364595 132 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC1P41238 Y_RNA.517-201ENST00000384551 106 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 MIR607-201ENST00000385241 96 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 HMGN2P8-201ENST00000391458 268 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 RNU4-65P-201ENST00000410473 140 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 C1DP2-201ENST00000418167 426 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC1P41238 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC1P41238 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC1P41238 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC1P41238 TIMM9P1-201ENST00000436122 256 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC004866.2-201ENST00000438285 481 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AL359073.1-201ENST00000448036 403 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBEC1P41238 MTCO3P20-201ENST00000454926 688 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 TPT1P7-201ENST00000458300 517 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 TMED11P-201ENST00000479478 690 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 RPL31P13-201ENST00000484151 370 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC1P41238 RNU6-1073P-201ENST00000517182 106 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBEC1P41238 NARSP2-201ENST00000518524 679 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBEC1P41238 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC1P41238 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
APOBEC1P41238 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBEC1P41238 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.41□□□□□ -1.86
APOBEC1P41238 AC099489.2-201ENST00000574976 260 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.41□□□□□ -1.86
APOBEC1P41238 FAM60BP-201ENST00000578364 658 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 RN7SL703P-201ENST00000578485 302 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 MIR5685-201ENST00000579080 79 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 MIR3118-1-201ENST00000581787 76 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.41□□□□□ -1.86
APOBEC1P41238 AL034351.1-201ENST00000605288 668 ntBASIC3.41□□□□□ -1.86
APOBEC1P41238 AC090425.2-201ENST00000608818 501 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms