Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
RFC3P40938 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.6□□□□□ -1.99
RFC3P40938 NDUFB4P6-201ENST00000436819 366 ntBASIC2.6□□□□□ -1.99
RFC3P40938 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.6□□□□□ -1.99
RFC3P40938 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.6□□□□□ -1.99
RFC3P40938 AL031183.1-201ENST00000457667 207 ntBASIC2.6□□□□□ -1.99
RFC3P40938 AC092757.1-201ENST00000467293 467 ntBASIC2.6□□□□□ -1.99
RFC3P40938 MTND2P31-201ENST00000512602 616 ntBASIC2.6□□□□□ -1.99
RFC3P40938 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFC3P40938 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RFC3P40938 CYB5AP5-201ENST00000549779 389 ntBASIC2.6□□□□□ -1.99
RFC3P40938 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.6□□□□□ -1.99
RFC3P40938 AC122134.1-202ENST00000569111 1201 ntBASIC2.6□□□□□ -1.99
RFC3P40938 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.6□□□□□ -1.99
RFC3P40938 AC138761.3-201ENST00000579993 334 ntBASIC2.6□□□□□ -1.99
RFC3P40938 AC008759.3-201ENST00000613300 508 ntBASIC2.6□□□□□ -1.99
RFC3P40938 AC006249.1-201ENST00000621223 471 ntBASIC2.6□□□□□ -1.99
RFC3P40938 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.6□□□□□ -1.99
RFC3P40938 AL157770.1-201ENST00000623049 439 ntBASIC2.6□□□□□ -1.99
RFC3P40938 U6.101-201ENST00000637707 76 ntBASIC2.6□□□□□ -1.99
RFC3P40938 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.6□□□□□ -1.99
RFC3P40938 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
RFC3P40938 AC009812.4-201ENST00000569134 1805 ntBASIC2.59□□□□□ -1.99
RFC3P40938 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RFC3P40938 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.59□□□□□ -1.99
RFC3P40938 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RFC3P40938 RNU6-851P-201ENST00000384565 107 ntBASIC2.59□□□□□ -1.99
RFC3P40938 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RFC3P40938 AL590004.2-201ENST00000404787 371 ntBASIC2.59□□□□□ -1.99
RFC3P40938 HMGN2P35-201ENST00000412164 270 ntBASIC2.59□□□□□ -1.99
RFC3P40938 USP9YP19-201ENST00000412165 485 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.59□□□□□ -1.99
RFC3P40938 AL096701.2-201ENST00000416920 238 ntBASIC2.59□□□□□ -1.99
RFC3P40938 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.59□□□□□ -1.99
RFC3P40938 RPL23AP74-201ENST00000437246 471 ntBASIC2.59□□□□□ -1.99
RFC3P40938 RAC1P7-201ENST00000445367 377 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC3P40938 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC3P40938 AC017099.1-201ENST00000448261 1028 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AC108938.1-201ENST00000451204 136 ntBASIC2.59□□□□□ -1.99
RFC3P40938 COX7A2P2-201ENST00000505291 250 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AC010460.2-201ENST00000509054 677 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RFC3P40938 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC3P40938 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC3P40938 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.59□□□□□ -1.99
RFC3P40938 AC107016.2-201ENST00000547968 190 ntBASIC2.59□□□□□ -1.99
RFC3P40938 CR383656.7-201ENST00000548164 174 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AL136520.1-202ENST00000555494 763 ntBASIC2.59□□□□□ -1.99
RFC3P40938 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC3P40938 AC034105.3-201ENST00000565294 442 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.59□□□□□ -1.99
RFC3P40938 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.59□□□□□ -1.99
RFC3P40938 MIR4672-201ENST00000583126 81 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.59□□□□□ -1.99
RFC3P40938 VN1R87P-201ENST00000596706 487 ntBASIC2.59□□□□□ -1.99
RFC3P40938 RPL12P50-201ENST00000603116 116 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AL035411.2-201ENST00000604022 421 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AC097504.2-201ENST00000608088 454 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AL592148.2-201ENST00000612210 372 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AC107308.1-201ENST00000615897 301 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AC087821.2-201ENST00000637086 450 ntBASIC2.59□□□□□ -1.99
RFC3P40938 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.59□□□□□ -1.99
RFC3P40938 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RFC3P40938 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -2
RFC3P40938 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
RFC3P40938 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.58□□□□□ -2
RFC3P40938 Y_RNA.110-201ENST00000363220 99 ntBASIC2.58□□□□□ -2
RFC3P40938 RNU6-236P-201ENST00000363886 106 ntBASIC2.58□□□□□ -2
RFC3P40938 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.58□□□□□ -2
RFC3P40938 AL031679.1-201ENST00000400616 525 ntBASIC2.58□□□□□ -2
RFC3P40938 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RFC3P40938 RNU2-47P-201ENST00000410649 186 ntBASIC2.58□□□□□ -2
RFC3P40938 RNU2-52P-201ENST00000410680 190 ntBASIC2.58□□□□□ -2
RFC3P40938 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
RFC3P40938 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.58□□□□□ -2
RFC3P40938 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.58□□□□□ -2
RFC3P40938 RPL36AP6-201ENST00000435770 321 ntBASIC2.58□□□□□ -2
RFC3P40938 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.58□□□□□ -2
RFC3P40938 AL121871.1-201ENST00000443413 436 ntBASIC2.58□□□□□ -2
RFC3P40938 UBBP3-201ENST00000445497 241 ntBASIC2.58□□□□□ -2
RFC3P40938 AC244505.3-201ENST00000454598 187 ntBASIC2.58□□□□□ -2
RFC3P40938 SUMO2P2-201ENST00000456482 255 ntBASIC2.58□□□□□ -2
RFC3P40938 RPL21P41-201ENST00000459863 264 ntBASIC2.58□□□□□ -2
RFC3P40938 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.58□□□□□ -2
RFC3P40938 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.58□□□□□ -2
RFC3P40938 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.58□□□□□ -2
RFC3P40938 MTND5P4-201ENST00000514978 288 ntBASIC2.58□□□□□ -2
RFC3P40938 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RFC3P40938 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.58□□□□□ -2
RFC3P40938 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.58□□□□□ -2
RFC3P40938 HSPE1P20-201ENST00000538133 289 ntBASIC2.58□□□□□ -2
RFC3P40938 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.58□□□□□ -2
RFC3P40938 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
RFC3P40938 AC125611.2-201ENST00000551907 647 ntBASIC2.58□□□□□ -2
RFC3P40938 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.58□□□□□ -2
RFC3P40938 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.58□□□□□ -2
RFC3P40938 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RFC3P40938 AC011260.1-201ENST00000578420 472 ntBASIC2.58□□□□□ -2
RFC3P40938 AC015688.2-201ENST00000584523 262 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms