Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPL31P1-201ENST00000398116 372 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AF274854.1-201ENST00000413236 615 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 MTATP6P27-201ENST00000416987 621 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.37□□□□□ -1.71
COL15A1P39059 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.37□□□□□ -1.71
COL15A1P39059 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.37□□□□□ -1.71
COL15A1P39059 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.37□□□□□ -1.71
COL15A1P39059 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.37□□□□□ -1.71
COL15A1P39059 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.37□□□□□ -1.71
COL15A1P39059 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.37□□□□□ -1.71
COL15A1P39059 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.37□□□□□ -1.71
COL15A1P39059 USP9YP12-201ENST00000450481 570 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.37□□□□□ -1.71
COL15A1P39059 MTCO3P20-201ENST00000454926 688 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AC104563.1-201ENST00000476147 376 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AC012170.1-201ENST00000495139 359 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL15A1P39059 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.37□□□□□ -1.71
COL15A1P39059 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.37□□□□□ -1.71
COL15A1P39059 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COL15A1P39059 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.37□□□□□ -1.71
COL15A1P39059 RN7SKP277-201ENST00000516895 283 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.37□□□□□ -1.71
COL15A1P39059 COX6CP8-201ENST00000522620 226 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.37□□□□□ -1.71
COL15A1P39059 AP002748.2-201ENST00000528671 348 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.37□□□□□ -1.71
COL15A1P39059 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.37□□□□□ -1.71
COL15A1P39059 AP005205.1-201ENST00000563503 508 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.37□□□□□ -1.71
COL15A1P39059 MIR4307-201ENST00000582802 84 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.37□□□□□ -1.71
COL15A1P39059 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.37□□□□□ -1.71
COL15A1P39059 AC091805.2-201ENST00000603848 235 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.37□□□□□ -1.71
COL15A1P39059 AL357080.1-201ENST00000617394 239 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 AL136964.1-201ENST00000622038 2990 ntBASIC4.37□□□□□ -1.71
COL15A1P39059 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.37□□□□□ -1.71
COL15A1P39059 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.37□□□□□ -1.71
COL15A1P39059 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL15A1P39059 AC006378.2-201ENST00000623178 2476 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 NMD3P1-201ENST00000439704 1488 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL15A1P39059 Z83843.1-201ENST00000604070 3685 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
COL15A1P39059 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.36□□□□□ -1.71
COL15A1P39059 RNU6-878P-201ENST00000384578 110 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 U3.26-201ENST00000391236 204 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 Y_RNA.598-201ENST00000410480 95 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 MTCO1P17-201ENST00000411522 491 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC012065.2-201ENST00000421295 375 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AL356583.2-201ENST00000426536 280 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL15A1P39059 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.36□□□□□ -1.71
COL15A1P39059 RPS29P31-201ENST00000446147 164 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.36□□□□□ -1.71
COL15A1P39059 AP001992.1-205ENST00000462248 379 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC087385.1-201ENST00000475062 312 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.36□□□□□ -1.71
COL15A1P39059 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.36□□□□□ -1.71
COL15A1P39059 AC023141.12-201ENST00000512399 199 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 RNU6-720P-201ENST00000516363 108 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.36□□□□□ -1.71
COL15A1P39059 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.36□□□□□ -1.71
COL15A1P39059 AC026333.2-201ENST00000542164 106 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.36□□□□□ -1.71
COL15A1P39059 AC005476.1-201ENST00000554427 397 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AL121576.1-201ENST00000556055 276 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 TPMTP1-201ENST00000592307 737 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 BNIP3P8-201ENST00000597863 560 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC004492.1-201ENST00000607036 742 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC006566.1-201ENST00000608943 513 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.36□□□□□ -1.71
COL15A1P39059 Z99129.1-201ENST00000612510 255 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC073968.1-201ENST00000618594 637 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC018755.4-201ENST00000619715 454 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC022149.2-201ENST00000621061 203 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 MIR6852-201ENST00000621699 66 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 AC027514.1-201ENST00000588561 1603 ntBASIC4.36□□□□□ -1.71
COL15A1P39059 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL15A1P39059 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.36□□□□□ -1.71
COL15A1P39059 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL15A1P39059 AC068647.1-201ENST00000489539 2265 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL15A1P39059 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL15A1P39059 AC092447.7-201ENST00000422212 1621 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL15A1P39059 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.35□□□□□ -1.71
COL15A1P39059 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL15A1P39059 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL15A1P39059 RNU6-28P-201ENST00000362378 107 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.35□□□□□ -1.71
COL15A1P39059 RNU6-533P-201ENST00000384144 107 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 RNU6-1215P-201ENST00000384441 102 ntBASIC4.35□□□□□ -1.71
COL15A1P39059 MIR153-1-201ENST00000384914 90 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms