Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 RN7SL499P-201ENST00000481141 276 ntBASIC2.82□□□□□ -1.96
SHMT2P34897 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.82□□□□□ -1.96
SHMT2P34897 AC111000.2-201ENST00000507775 550 ntBASIC2.82□□□□□ -1.96
SHMT2P34897 OR10V3P-201ENST00000525712 725 ntBASIC2.82□□□□□ -1.96
SHMT2P34897 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.82□□□□□ -1.96
SHMT2P34897 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.82□□□□□ -1.96
SHMT2P34897 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.82□□□□□ -1.96
SHMT2P34897 AC010653.1-201ENST00000571108 881 ntBASIC2.82□□□□□ -1.96
SHMT2P34897 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.82□□□□□ -1.96
SHMT2P34897 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.82□□□□□ -1.96
SHMT2P34897 MTND3P19-201ENST00000603825 345 ntBASIC2.82□□□□□ -1.96
SHMT2P34897 AC092953.2-201ENST00000608000 699 ntBASIC2.82□□□□□ -1.96
SHMT2P34897 AC004009.2-201ENST00000623016 728 ntBASIC2.82□□□□□ -1.96
SHMT2P34897 AC090617.7-201ENST00000623952 126 ntBASIC2.82□□□□□ -1.96
SHMT2P34897 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.82□□□□□ -1.96
SHMT2P34897 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SHMT2P34897 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHMT2P34897 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHMT2P34897 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 NACA3P-201ENST00000359690 648 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 RNU6-1155P-201ENST00000363554 107 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 U8.9-201ENST00000365667 134 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 SNORA26.7-201ENST00000391288 122 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 DHFRP6-201ENST00000401776 268 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 NDUFB4P4-201ENST00000404822 243 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 U3.42-201ENST00000408746 214 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 MTATP6P20-201ENST00000414147 562 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.81□□□□□ -1.96
SHMT2P34897 HSPE1P1-201ENST00000421494 318 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.81□□□□□ -1.96
SHMT2P34897 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.81□□□□□ -1.96
SHMT2P34897 RPS20P5-201ENST00000434808 360 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 YWHAZP7-201ENST00000436906 631 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 RABEPKP1-201ENST00000440529 1026 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.81□□□□□ -1.96
SHMT2P34897 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.81□□□□□ -1.96
SHMT2P34897 RPL18AP17-201ENST00000455326 198 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHMT2P34897 SUMO2P2-201ENST00000456482 255 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 RPL9P33-201ENST00000484311 566 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.81□□□□□ -1.96
SHMT2P34897 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.81□□□□□ -1.96
SHMT2P34897 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.81□□□□□ -1.96
SHMT2P34897 SNRPGP16-201ENST00000533275 226 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 AC024224.1-201ENST00000538284 609 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 SETP7-201ENST00000552169 453 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHMT2P34897 MTCYBP23-201ENST00000558717 1102 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 AC034105.3-201ENST00000565294 442 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.81□□□□□ -1.96
SHMT2P34897 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.81□□□□□ -1.96
SHMT2P34897 VIS1.1-201ENST00000610517 203 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 AC243773.3-201ENST00000613270 256 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 AL355810.1-201ENST00000614629 552 ntBASIC2.81□□□□□ -1.96
SHMT2P34897 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHMT2P34897 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
SHMT2P34897 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHMT2P34897 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHMT2P34897 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHMT2P34897 RNU6-50P-201ENST00000362356 103 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 RNU6-413P-201ENST00000384115 107 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 RNU6-925P-201ENST00000384629 104 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 ERHP2-201ENST00000402323 299 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AL136310.1-201ENST00000404926 654 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AL356320.2-201ENST00000417263 507 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.8□□□□□ -1.96
SHMT2P34897 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AL139281.1-201ENST00000422120 335 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AC019178.2-201ENST00000423595 505 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.8□□□□□ -1.96
SHMT2P34897 AC007742.1-201ENST00000425789 329 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 USP9YP11-201ENST00000427537 717 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 SETP8-201ENST00000435341 628 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHMT2P34897 ELOCP26-201ENST00000436067 329 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.8□□□□□ -1.96
SHMT2P34897 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.8□□□□□ -1.96
SHMT2P34897 EEF1A1P39-201ENST00000440791 250 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AL589880.1-201ENST00000448271 287 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.8□□□□□ -1.96
SHMT2P34897 RPS29P26-201ENST00000477483 171 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AC090453.1-201ENST00000495560 436 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 MTCYBP17-201ENST00000503579 789 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AC105914.1-201ENST00000511798 226 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 RNY4P37-201ENST00000516225 96 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 SCARNA13-201ENST00000516672 275 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 RNU6-711P-201ENST00000517255 106 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.8□□□□□ -1.96
SHMT2P34897 HSPA8P13-201ENST00000523715 472 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 OR5AK1P-201ENST00000524837 922 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AC239860.2-201ENST00000525886 270 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.8□□□□□ -1.96
SHMT2P34897 AC007536.1-201ENST00000533382 349 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.8□□□□□ -1.96
SHMT2P34897 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.8□□□□□ -1.96
SHMT2P34897 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SHMT2P34897 AP001029.3-201ENST00000588063 596 ntBASIC2.8□□□□□ -1.96
SHMT2P34897 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms