Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.9□□□□□ -1.79
TM4SF1P30408 AC072039.2-201ENST00000608883 439 ntBASIC3.9□□□□□ -1.79
TM4SF1P30408 AL450489.1-201ENST00000612071 468 ntBASIC3.9□□□□□ -1.79
TM4SF1P30408 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.9□□□□□ -1.79
TM4SF1P30408 AP002791.1-201ENST00000623291 381 ntBASIC3.9□□□□□ -1.79
TM4SF1P30408 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.9□□□□□ -1.79
TM4SF1P30408 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
TM4SF1P30408 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TM4SF1P30408 ZNF542P-204ENST00000482727 1305 ntBASIC3.9□□□□□ -1.79
TM4SF1P30408 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
TM4SF1P30408 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
TM4SF1P30408 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TM4SF1P30408 RNU6-97P-201ENST00000363387 104 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 RNU5A-2P-201ENST00000384337 116 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 RNU2-37P-201ENST00000410695 177 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 RAP1BP1-201ENST00000412709 553 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.89□□□□□ -1.79
TM4SF1P30408 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.89□□□□□ -1.79
TM4SF1P30408 AC127526.1-201ENST00000417526 366 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 TOMM22P1-201ENST00000418578 312 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 RPL23AP82-202ENST00000427528 469 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.89□□□□□ -1.79
TM4SF1P30408 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.89□□□□□ -1.79
TM4SF1P30408 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.89□□□□□ -1.79
TM4SF1P30408 ATG12P2-201ENST00000456830 416 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AL139824.2-201ENST00000458731 1095 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 CENPBD1P1-201ENST00000464061 469 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 VN1R17P-201ENST00000472048 1090 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 RPS4XP13-201ENST00000483219 789 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AP001025.2-201ENST00000490908 477 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AL024509.2-201ENST00000493462 493 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AC106872.3-201ENST00000495104 446 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AC021146.1-201ENST00000511202 716 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.89□□□□□ -1.79
TM4SF1P30408 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
TM4SF1P30408 AC103783.1-201ENST00000520506 373 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AC091515.1-201ENST00000548110 679 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.89□□□□□ -1.79
TM4SF1P30408 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.89□□□□□ -1.79
TM4SF1P30408 AL353997.4-201ENST00000586196 166 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.89□□□□□ -1.79
TM4SF1P30408 AC012669.1-201ENST00000603209 283 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AP000811.1-201ENST00000603803 651 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 AL133507.1-201ENST00000605269 557 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.89□□□□□ -1.79
TM4SF1P30408 AC008725.1-201ENST00000605123 2263 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TM4SF1P30408 MTCO1P9-201ENST00000505577 1534 ntBASIC3.89□□□□□ -1.79
TM4SF1P30408 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TM4SF1P30408 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.89□□□□□ -1.79
TM4SF1P30408 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.89□□□□□ -1.79
TM4SF1P30408 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM4SF1P30408 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM4SF1P30408 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.88□□□□□ -1.79
TM4SF1P30408 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM4SF1P30408 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.88□□□□□ -1.79
TM4SF1P30408 MIR22-201ENST00000362190 85 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 RNA5SP88-201ENST00000365560 109 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 RNU6-723P-201ENST00000383973 107 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 RNU6-1200P-201ENST00000384162 107 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 RSL24D1P4-201ENST00000400938 484 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 PIGPP2-201ENST00000411569 458 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.88□□□□□ -1.79
TM4SF1P30408 AL139413.1-201ENST00000421309 217 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 MTND4P20-201ENST00000424125 869 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.88□□□□□ -1.79
TM4SF1P30408 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.88□□□□□ -1.79
TM4SF1P30408 HMGB1P12-201ENST00000438594 598 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.88□□□□□ -1.79
TM4SF1P30408 EEF1E1P1-201ENST00000446998 430 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.88□□□□□ -1.79
TM4SF1P30408 HMGB1P22-201ENST00000505315 124 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.88□□□□□ -1.79
TM4SF1P30408 AC093677.1-201ENST00000514414 678 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.88□□□□□ -1.79
TM4SF1P30408 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM4SF1P30408 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.88□□□□□ -1.79
TM4SF1P30408 AL158211.1-201ENST00000566763 763 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.88□□□□□ -1.79
TM4SF1P30408 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.88□□□□□ -1.79
TM4SF1P30408 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.88□□□□□ -1.79
TM4SF1P30408 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM4SF1P30408 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.88□□□□□ -1.79
TM4SF1P30408 AL360181.4-201ENST00000621752 134 ntBASIC3.88□□□□□ -1.79
TM4SF1P30408 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.88□□□□□ -1.79
TM4SF1P30408 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.88□□□□□ -1.79
TM4SF1P30408 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM4SF1P30408 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
TM4SF1P30408 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
TM4SF1P30408 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.87□□□□□ -1.79
TM4SF1P30408 RNA5SP432-201ENST00000362480 116 ntBASIC3.87□□□□□ -1.79
TM4SF1P30408 RNU6-289P-201ENST00000364093 107 ntBASIC3.87□□□□□ -1.79
TM4SF1P30408 Y_RNA.234-201ENST00000364409 97 ntBASIC3.87□□□□□ -1.79
TM4SF1P30408 SNORD67-201ENST00000390833 111 ntBASIC3.87□□□□□ -1.79
TM4SF1P30408 MTND4P13-201ENST00000402078 1023 ntBASIC3.87□□□□□ -1.79
TM4SF1P30408 AL356421.1-201ENST00000403255 413 ntBASIC3.87□□□□□ -1.79
TM4SF1P30408 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.87□□□□□ -1.79
TM4SF1P30408 BEND7P1-201ENST00000422058 457 ntBASIC3.87□□□□□ -1.79
TM4SF1P30408 AC234781.2-201ENST00000426370 994 ntBASIC3.87□□□□□ -1.79
TM4SF1P30408 AC108734.1-201ENST00000439549 399 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms