Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.32□□□□□ -1.72
POLR2AP24928 RNU6-430P-201ENST00000517078 107 ntBASIC4.32□□□□□ -1.72
POLR2AP24928 HIGD1AP6-201ENST00000521833 279 ntBASIC4.32□□□□□ -1.72
POLR2AP24928 HSPA8P13-201ENST00000523715 472 ntBASIC4.32□□□□□ -1.72
POLR2AP24928 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.32□□□□□ -1.72
POLR2AP24928 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.32□□□□□ -1.72
POLR2AP24928 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR2AP24928 BNIP3P23-201ENST00000599655 511 ntBASIC4.32□□□□□ -1.72
POLR2AP24928 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR2AP24928 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.32□□□□□ -1.72
POLR2AP24928 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
POLR2AP24928 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
POLR2AP24928 AC008079.2-201ENST00000623543 20396 ntBASIC4.32□□□□□ -1.72
POLR2AP24928 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
POLR2AP24928 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
POLR2AP24928 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
POLR2AP24928 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 AC134882.1-201ENST00000603738 1676 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.31□□□□□ -1.72
POLR2AP24928 RNU6-289P-201ENST00000364093 107 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 SNORD116-23-201ENST00000384645 92 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.31□□□□□ -1.72
POLR2AP24928 AC011742.1-201ENST00000431448 434 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.31□□□□□ -1.72
POLR2AP24928 RPL17P49-201ENST00000443728 411 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.31□□□□□ -1.72
POLR2AP24928 AC139783.2-201ENST00000504847 1145 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.31□□□□□ -1.72
POLR2AP24928 Vault.1-201ENST00000516474 102 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 SNORD60.2-201ENST00000516883 86 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.31□□□□□ -1.72
POLR2AP24928 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.31□□□□□ -1.72
POLR2AP24928 AL136363.1-201ENST00000605349 337 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 MIR7154-201ENST00000620673 73 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.31□□□□□ -1.72
POLR2AP24928 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
POLR2AP24928 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
POLR2AP24928 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
POLR2AP24928 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
POLR2AP24928 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
POLR2AP24928 NMD3P1-201ENST00000439704 1488 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
POLR2AP24928 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
POLR2AP24928 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.31□□□□□ -1.72
POLR2AP24928 AL049780.3-201ENST00000624612 1583 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 RPL7P26-201ENST00000333817 754 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 RPS4XP8-201ENST00000402039 771 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 RPS20P2-201ENST00000402520 389 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 Y_RNA.608-201ENST00000410647 95 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 TPMTP2-201ENST00000414372 726 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AC017079.2-201ENST00000416102 485 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 BX295541.1-201ENST00000417774 250 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AC092634.6-201ENST00000418558 192 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 USP9YP20-201ENST00000419224 558 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 SNRPEP10-201ENST00000420249 274 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 LSM1P1-201ENST00000438629 273 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.31□□□□□ -1.72
POLR2AP24928 NIPA2P5-201ENST00000452282 464 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 RNU6-277P-201ENST00000516272 106 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.31□□□□□ -1.72
POLR2AP24928 AL391646.1-201ENST00000603860 190 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AC011468.4-201ENST00000603942 409 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 YPEL5P2-201ENST00000605553 359 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AC006504.8-201ENST00000621046 635 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 TPTEP1-208ENST00000636884 213 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AL773545.4-201ENST00000637262 310 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AL513478.4-201ENST00000641636 310 ntBASIC4.31□□□□□ -1.72
POLR2AP24928 AL365440.1-201ENST00000436135 2167 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
POLR2AP24928 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
POLR2AP24928 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
POLR2AP24928 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.3□□□□□ -1.72
POLR2AP24928 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
POLR2AP24928 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
POLR2AP24928 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.3□□□□□ -1.72
POLR2AP24928 Y_RNA.166-201ENST00000363730 102 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 RNY4P34-201ENST00000364779 95 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.3□□□□□ -1.72
POLR2AP24928 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.3□□□□□ -1.72
POLR2AP24928 MTND4LP10-201ENST00000435146 291 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.3□□□□□ -1.72
POLR2AP24928 MTND1P18-201ENST00000448191 573 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.3□□□□□ -1.72
POLR2AP24928 PMCHL2-203ENST00000457791 237 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 AC008481.1-201ENST00000463278 396 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
POLR2AP24928 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 FTH1P9-201ENST00000513251 355 ntBASIC4.3□□□□□ -1.72
POLR2AP24928 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.3□□□□□ -1.72
POLR2AP24928 RNU6-327P-201ENST00000516270 127 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms