Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 RN7SKP282-201ENST00000516824 299 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 SCARNA20.6-201ENST00000517251 106 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 RPL21P12-201ENST00000559810 515 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AC023813.2-201ENST00000564321 469 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 MIR2682-201ENST00000580305 110 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AC006270.3-201ENST00000605967 1036 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AC107075.1-201ENST00000613695 314 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AL161629.2-201ENST00000615347 275 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 AC091903.1-201ENST00000624322 454 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 OR5H6-203ENST00000642105 978 ntBASIC3.25□□□□□ -1.89
HLA-DPA1P20036 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DPA1P20036 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 Y_RNA.192-201ENST00000363977 102 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 U3.11-201ENST00000364476 212 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 Y_RNA.333-201ENST00000365274 102 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 SNORD116.1-201ENST00000365628 92 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 RNU6-198P-201ENST00000384258 104 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 MIR325-201ENST00000385260 98 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AC008850.1-201ENST00000427546 362 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 ZYG11AP1-201ENST00000430329 837 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AC091862.1-201ENST00000438016 1100 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 RPL23AP58-201ENST00000440453 469 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AL591503.2-201ENST00000442314 1005 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AL031313.1-201ENST00000448435 256 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 RPL21P134-201ENST00000453468 483 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 MEMO1P3-201ENST00000459811 302 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AC010468.1-201ENST00000461022 817 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AC104563.1-201ENST00000476147 376 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 ARL4AP2-201ENST00000507378 601 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AC116353.3-201ENST00000511215 249 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 RAC1P5-201ENST00000512182 576 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 TTC39CP1-201ENST00000512513 755 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 RNA5SP217-201ENST00000515959 91 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 SCARNA15.2-201ENST00000516409 127 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 RNU6-1256P-201ENST00000516539 103 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 RNU6-928P-201ENST00000516876 104 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AC006518.1-201ENST00000541449 943 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 OR4H12P-201ENST00000556269 907 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 MIR4509-3-201ENST00000578671 94 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 MIR4509-2-201ENST00000583920 94 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AL133507.1-201ENST00000605269 557 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 MIR4509-1-201ENST00000618224 94 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 AC099654.9-201ENST00000637055 678 ntBASIC3.24□□□□□ -1.89
HLA-DPA1P20036 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HLA-DPA1P20036 API5P2-201ENST00000397055 1498 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 RNU4-68P-201ENST00000364314 141 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AL356421.1-201ENST00000403255 413 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 MIR1289-1-201ENST00000408836 144 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC063979.1-201ENST00000415539 377 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 SPA17P1-201ENST00000416656 452 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 ATG3P1-201ENST00000419507 911 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AL645937.1-202ENST00000421799 937 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC005300.1-201ENST00000428401 373 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 SDAD1P2-201ENST00000441308 2028 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC092798.1-201ENST00000458542 409 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC021382.1-201ENST00000483523 359 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 MTND3P3-201ENST00000505004 126 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 PHBP14-201ENST00000512887 367 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC124947.2-202ENST00000552735 133 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AL132857.1-201ENST00000555180 708 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC009712.1-201ENST00000564938 316 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC068313.1-201ENST00000604028 1008 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AL160237.3-201ENST00000604114 1013 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AC245297.2-201ENST00000610119 565 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AL591516.1-201ENST00000611326 274 ntBASIC3.23□□□□□ -1.89
HLA-DPA1P20036 AL450489.1-201ENST00000612071 468 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 150.7 ms