Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.17□□□□□ -2.06
COL11A1P12107 AC019070.1-201ENST00000415008 1024 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 AC245517.4-201ENST00000448601 281 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 MTND5P8-201ENST00000449817 1083 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.17□□□□□ -2.06
COL11A1P12107 AC090543.1-201ENST00000492168 485 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 AC133963.2-201ENST00000513686 578 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 AC087272.1-201ENST00000523624 533 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 AC103810.1-201ENST00000579873 453 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.17□□□□□ -2.06
COL11A1P12107 HMGB1P51-201ENST00000605166 638 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.17□□□□□ -2.06
COL11A1P12107 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.17□□□□□ -2.06
COL11A1P12107 AC091953.2-201ENST00000623979 160 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 FAM157B-203ENST00000639350 358 ntBASIC2.17□□□□□ -2.06
COL11A1P12107 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COL11A1P12107 MIR378A-201ENST00000362177 66 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 Y_RNA.355-201ENST00000365462 98 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 MIR489-201ENST00000384923 84 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 AL589655.1-201ENST00000405398 482 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.16□□□□□ -2.06
COL11A1P12107 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.16□□□□□ -2.06
COL11A1P12107 AC104472.2-201ENST00000469035 601 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 SCARNA17.1-201ENST00000516211 143 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 SCARNA17.2-201ENST00000516334 143 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 RN7SKP96-201ENST00000516948 297 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.16□□□□□ -2.06
COL11A1P12107 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COL11A1P12107 DNAJC19P9-201ENST00000555084 351 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.16□□□□□ -2.06
COL11A1P12107 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.16□□□□□ -2.06
COL11A1P12107 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.16□□□□□ -2.06
COL11A1P12107 AC009314.1-201ENST00000603871 304 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 AC090425.2-201ENST00000608818 501 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 AC009570.1-201ENST00000609599 745 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 SCARNA17.4-201ENST00000614296 143 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 AC003001.2-201ENST00000616294 831 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 AC080188.3-201ENST00000624842 748 ntBASIC2.16□□□□□ -2.06
COL11A1P12107 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
COL11A1P12107 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COL11A1P12107 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.16□□□□□ -2.06
COL11A1P12107 AC012321.1-201ENST00000561622 1588 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 RNY1P10-201ENST00000363268 113 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 RNU6-457P-201ENST00000363999 107 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 RNA5SP270-201ENST00000411361 118 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 NDUFA5P10-201ENST00000432147 357 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 OR4V1P-201ENST00000525394 1140 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 AP003168.1-201ENST00000530091 307 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.15□□□□□ -2.06
COL11A1P12107 ZNF92P3-201ENST00000596594 954 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 AC016877.3-201ENST00000606778 504 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 AC084768.2-201ENST00000622736 221 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 AC104820.1-201ENST00000624183 307 ntBASIC2.15□□□□□ -2.06
COL11A1P12107 MTND4P21-201ENST00000453886 1357 ntBASIC2.15□□□□□ -2.07
COL11A1P12107 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.15□□□□□ -2.07
COL11A1P12107 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
COL11A1P12107 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL11A1P12107 AC005336.3-201ENST00000623833 2679 ntBASIC2.15□□□□□ -2.07
COL11A1P12107 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
COL11A1P12107 MIR7-2-201ENST00000384970 110 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 RNA5SP338-201ENST00000410495 85 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.14□□□□□ -2.07
COL11A1P12107 EIF1AXP1-201ENST00000419267 435 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.14□□□□□ -2.07
COL11A1P12107 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.14□□□□□ -2.07
COL11A1P12107 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.14□□□□□ -2.07
COL11A1P12107 RNU6-717P-201ENST00000459076 104 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.14□□□□□ -2.07
COL11A1P12107 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.14□□□□□ -2.07
COL11A1P12107 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.14□□□□□ -2.07
COL11A1P12107 OR8K2P-201ENST00000524645 927 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.14□□□□□ -2.07
COL11A1P12107 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.14□□□□□ -2.07
COL11A1P12107 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC2.14□□□□□ -2.07
COL11A1P12107 VIS1.1-201ENST00000610517 203 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AC006213.5-201ENST00000619673 288 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AC073592.7-201ENST00000623659 507 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL11A1P12107 RNU6-40P-201ENST00000384254 107 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 MIR1323-201ENST00000408090 73 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 MTND4P24-201ENST00000424002 397 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.14□□□□□ -2.07
COL11A1P12107 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL11A1P12107 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.14□□□□□ -2.07
COL11A1P12107 AC114878.1-201ENST00000441166 358 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AL500527.1-201ENST00000448532 255 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AC093392.2-201ENST00000450682 337 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AC104308.1-201ENST00000454621 333 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.14□□□□□ -2.07
COL11A1P12107 RPL23AP63-201ENST00000498752 471 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AC027338.1-201ENST00000514840 825 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 RNU6-1004P-201ENST00000516584 111 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 RNA5SP468-201ENST00000516782 93 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.14□□□□□ -2.07
COL11A1P12107 SUB1P3-201ENST00000564581 315 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 MTND4P34-201ENST00000572715 1371 ntBASIC2.14□□□□□ -2.07
COL11A1P12107 RPS3AP23-202ENST00000574601 686 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms