Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.82□□□□□ -2.12
FREM3P0C091 MTND5P28-201ENST00000438005 1594 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
FREM3P0C091 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
FREM3P0C091 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
FREM3P0C091 Y_RNA.140-201ENST00000363474 103 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 SNORA80E-201ENST00000384744 137 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 MIR9-3-201ENST00000385084 90 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
FREM3P0C091 Y_RNA.595-201ENST00000410403 105 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 RNA5SP38-201ENST00000410750 119 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.82□□□□□ -2.12
FREM3P0C091 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.82□□□□□ -2.12
FREM3P0C091 MTCO3P30-201ENST00000426425 670 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 AL590664.1-201ENST00000448065 339 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 OR51B8P-201ENST00000449892 769 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 RNU6-717P-201ENST00000459076 104 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 snoU13.3-201ENST00000459441 104 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 RPL23AP42-201ENST00000471152 471 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.82□□□□□ -2.12
FREM3P0C091 CKS1BP2-201ENST00000497342 240 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 RNF138P1-201ENST00000502765 546 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 SUB1P3-201ENST00000564581 315 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.82□□□□□ -2.12
FREM3P0C091 AC016727.1-205ENST00000605437 569 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 AC068831.7-201ENST00000616954 363 ntBASIC1.82□□□□□ -2.12
FREM3P0C091 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
FREM3P0C091 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.82□□□□□ -2.12
FREM3P0C091 RNA5SP139-201ENST00000364340 117 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 AC008173.1-201ENST00000418901 264 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.81□□□□□ -2.12
FREM3P0C091 AC007182.2-201ENST00000489251 402 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.81□□□□□ -2.12
FREM3P0C091 AC008885.2-201ENST00000509506 930 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 AC022616.2-201ENST00000523185 300 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 ATP5F1P5-201ENST00000526403 760 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.81□□□□□ -2.12
FREM3P0C091 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.81□□□□□ -2.12
FREM3P0C091 AC020895.1-201ENST00000595362 272 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 AL121917.1-203ENST00000605534 577 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 AC090897.3-201ENST00000636973 1157 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.81□□□□□ -2.12
FREM3P0C091 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
FREM3P0C091 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
FREM3P0C091 RNU6-837P-201ENST00000391056 108 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC1.81□□□□□ -2.12
FREM3P0C091 AL445646.1-201ENST00000431784 216 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.81□□□□□ -2.12
FREM3P0C091 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.81□□□□□ -2.12
FREM3P0C091 RABEPKP1-201ENST00000440529 1026 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 FABP5P6-201ENST00000510588 409 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 RNU6-991P-201ENST00000516168 107 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.81□□□□□ -2.12
FREM3P0C091 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
FREM3P0C091 AC068339.2-201ENST00000534395 618 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.81□□□□□ -2.12
FREM3P0C091 AC110792.4-201ENST00000609843 298 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 AL391597.1-201ENST00000618707 694 ntBASIC1.81□□□□□ -2.12
FREM3P0C091 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.81□□□□□ -2.12
FREM3P0C091 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
FREM3P0C091 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.81□□□□□ -2.12
FREM3P0C091 AL512646.1-201ENST00000269395 1077 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
FREM3P0C091 AL161781.1-201ENST00000354277 403 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 RNU6-670P-201ENST00000364312 104 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.8□□□□□ -2.12
FREM3P0C091 AL356057.2-201ENST00000403318 432 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 SDR42E1P3-201ENST00000438345 502 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 AL603825.1-201ENST00000438481 80 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 UBE2V1P5-201ENST00000440070 405 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 AL034418.1-201ENST00000448675 860 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.8□□□□□ -2.12
FREM3P0C091 AP001804.3-201ENST00000525146 880 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 OSBPL9P3-201ENST00000534523 595 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
FREM3P0C091 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
FREM3P0C091 AC092470.1-201ENST00000546187 132 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 AC074029.2-201ENST00000551045 634 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 AC126177.3-201ENST00000551839 688 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 SNRPGP19-201ENST00000603826 189 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 AC009314.1-201ENST00000603871 304 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 AC013562.2-201ENST00000611632 603 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
FREM3P0C091 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
FREM3P0C091 AC090740.1-201ENST00000623193 2262 ntBASIC1.8□□□□□ -2.12
FREM3P0C091 AC138915.1-201ENST00000565427 1685 ntBASIC1.79□□□□□ -2.12
FREM3P0C091 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
FREM3P0C091 WARS2P1-201ENST00000429678 537 ntBASIC1.79□□□□□ -2.12
FREM3P0C091 AL513321.1-201ENST00000441175 761 ntBASIC1.79□□□□□ -2.12
FREM3P0C091 AC233279.1-201ENST00000455300 423 ntBASIC1.79□□□□□ -2.12
FREM3P0C091 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.79□□□□□ -2.12
FREM3P0C091 AC092436.1-201ENST00000506450 503 ntBASIC1.79□□□□□ -2.12
FREM3P0C091 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.79□□□□□ -2.12
FREM3P0C091 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.79□□□□□ -2.12
FREM3P0C091 AMZ2P1-203ENST00000565833 850 ntBASIC1.79□□□□□ -2.12
FREM3P0C091 OR4G1P-201ENST00000588632 938 ntBASIC1.79□□□□□ -2.12
FREM3P0C091 AC120053.1-201ENST00000607706 736 ntBASIC1.79□□□□□ -2.12
FREM3P0C091 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
FREM3P0C091 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms