Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOAP06340 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOAP06340 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOAP06340 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOAP06340 AC006026.1-201ENST00000444025 1803 ntBASIC4.49□□□□□ -1.69
HLA-DOAP06340 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOAP06340 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOAP06340 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOAP06340 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DOAP06340 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 RNA5SP119-201ENST00000362715 117 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 RNU6-1243P-201ENST00000364028 107 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 Y_RNA.509-201ENST00000384506 99 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 MTND3P17-201ENST00000416968 344 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 AC073136.2-201ENST00000417282 849 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 SYF2P2-201ENST00000417620 583 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 EIF4EP1-201ENST00000422311 642 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 FAM103A2P-201ENST00000444122 354 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 RPS26P56-201ENST00000444468 240 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 TRBV26-201ENST00000456572 344 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 PMCHL2-203ENST00000457791 237 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 PLGLA-201ENST00000465668 449 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 RN7SKP18-201ENST00000516005 275 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 RNU6-1281P-201ENST00000516223 105 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 RNU6-1220P-201ENST00000517126 108 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 AC022616.6-201ENST00000520479 119 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 OR8L1P-201ENST00000534005 955 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 AC012507.3-201ENST00000603556 477 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 AL161734.1-201ENST00000609720 557 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 AP001273.1-201ENST00000624493 3152 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DOAP06340 AC020633.1-201ENST00000468439 2247 ntBASIC4.48□□□□□ -1.69
HLA-DOAP06340 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DOAP06340 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DOAP06340 RNU5E-1-201ENST00000362477 120 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 RNU6-744P-201ENST00000365557 107 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 RNU6-1316P-201ENST00000384242 108 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 RNU6-1011P-201ENST00000384668 107 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 RNU2-21P-201ENST00000410368 188 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC127391.1-201ENST00000411737 98 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC133104.1-201ENST00000429100 218 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 GTF2IP20-201ENST00000431663 360 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 RPL7P54-201ENST00000438336 674 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 ELOCP23-201ENST00000452014 332 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC104619.4-201ENST00000510773 249 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 MTND3P22-201ENST00000510932 243 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC010493.1-201ENST00000513479 292 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AF235103.2-201ENST00000525753 346 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC034268.2-201ENST00000571784 482 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 NRBF2P1-201ENST00000587407 859 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AL359999.1-201ENST00000604513 294 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC012603.1-201ENST00000606424 528 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 AL133173.2-201ENST00000614270 90 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC010133.1-201ENST00000615809 842 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DOAP06340 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
HLA-DOAP06340 AC097504.1-201ENST00000515103 2415 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DOAP06340 IPO8P1-201ENST00000455509 3109 ntBASIC4.47□□□□□ -1.69
HLA-DOAP06340 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HLA-DOAP06340 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms