Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC010460.2-201ENST00000509054 677 ntBASIC2.42□□□□□ -2.02
CD74P04233 RNU6-27P-201ENST00000516146 107 ntBASIC2.42□□□□□ -2.02
CD74P04233 AC091163.3-201ENST00000518269 1144 ntBASIC2.42□□□□□ -2.02
CD74P04233 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.42□□□□□ -2.02
CD74P04233 HMGB1P41-201ENST00000520234 440 ntBASIC2.42□□□□□ -2.02
CD74P04233 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.42□□□□□ -2.02
CD74P04233 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.42□□□□□ -2.02
CD74P04233 AC128657.1-201ENST00000549459 145 ntBASIC2.42□□□□□ -2.02
CD74P04233 AC011611.1-201ENST00000552179 197 ntBASIC2.42□□□□□ -2.02
CD74P04233 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.42□□□□□ -2.02
CD74P04233 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.42□□□□□ -2.02
CD74P04233 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.42□□□□□ -2.02
CD74P04233 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.42□□□□□ -2.02
CD74P04233 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.42□□□□□ -2.02
CD74P04233 AC009269.6-201ENST00000621778 588 ntBASIC2.42□□□□□ -2.02
CD74P04233 AC104985.3-201ENST00000623479 597 ntBASIC2.42□□□□□ -2.02
CD74P04233 MIR3651-201ENST00000630427 90 ntBASIC2.42□□□□□ -2.02
CD74P04233 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.42□□□□□ -2.02
CD74P04233 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
CD74P04233 AC008669.1-201ENST00000565823 2178 ntBASIC2.42□□□□□ -2.02
CD74P04233 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CD74P04233 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CD74P04233 AC026241.1-201ENST00000517873 2142 ntBASIC2.41□□□□□ -2.02
CD74P04233 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.41□□□□□ -2.02
CD74P04233 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.41□□□□□ -2.02
CD74P04233 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.41□□□□□ -2.02
CD74P04233 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CD74P04233 snoZ40.1-201ENST00000364540 72 ntBASIC2.41□□□□□ -2.02
CD74P04233 SNORA9.2-201ENST00000365361 133 ntBASIC2.41□□□□□ -2.02
CD74P04233 MIR620-201ENST00000385232 95 ntBASIC2.41□□□□□ -2.02
CD74P04233 U3.29-201ENST00000391296 212 ntBASIC2.41□□□□□ -2.02
CD74P04233 TAF9BP1-201ENST00000396646 746 ntBASIC2.41□□□□□ -2.02
CD74P04233 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.41□□□□□ -2.02
CD74P04233 AL161449.1-201ENST00000414531 1199 ntBASIC2.41□□□□□ -2.02
CD74P04233 LUZP4P1-201ENST00000415420 344 ntBASIC2.41□□□□□ -2.02
CD74P04233 AL513477.1-202ENST00000417061 214 ntBASIC2.41□□□□□ -2.02
CD74P04233 AL137014.1-201ENST00000420490 1226 ntBASIC2.41□□□□□ -2.02
CD74P04233 RPL7P30-201ENST00000420888 709 ntBASIC2.41□□□□□ -2.02
CD74P04233 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD74P04233 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.41□□□□□ -2.02
CD74P04233 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.41□□□□□ -2.02
CD74P04233 AC079780.1-201ENST00000428259 207 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.41□□□□□ -2.02
CD74P04233 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC004866.2-201ENST00000438285 481 ntBASIC2.41□□□□□ -2.02
CD74P04233 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.41□□□□□ -2.02
CD74P04233 AL591503.2-201ENST00000442314 1005 ntBASIC2.41□□□□□ -2.02
CD74P04233 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.41□□□□□ -2.02
CD74P04233 OR6K5P-201ENST00000447050 945 ntBASIC2.41□□□□□ -2.02
CD74P04233 RPS4XP10-201ENST00000465034 731 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC003982.1-202ENST00000469928 248 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC096571.1-202ENST00000506634 735 ntBASIC2.41□□□□□ -2.02
CD74P04233 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.41□□□□□ -2.02
CD74P04233 RAC1P5-201ENST00000512182 576 ntBASIC2.41□□□□□ -2.02
CD74P04233 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.41□□□□□ -2.02
CD74P04233 SCARNA13-201ENST00000516672 275 ntBASIC2.41□□□□□ -2.02
CD74P04233 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.41□□□□□ -2.02
CD74P04233 AC027309.2-201ENST00000520566 192 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC010376.1-201ENST00000522101 334 ntBASIC2.41□□□□□ -2.02
CD74P04233 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD74P04233 AL133271.1-201ENST00000538229 291 ntBASIC2.41□□□□□ -2.02
CD74P04233 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.41□□□□□ -2.02
CD74P04233 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.41□□□□□ -2.02
CD74P04233 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.41□□□□□ -2.02
CD74P04233 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.41□□□□□ -2.02
CD74P04233 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.41□□□□□ -2.02
CD74P04233 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.41□□□□□ -2.02
CD74P04233 BNIP3P27-201ENST00000599991 412 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC079089.3-201ENST00000603094 673 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC012669.1-201ENST00000603209 283 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC015871.2-201ENST00000603605 948 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC010738.1-201ENST00000604970 987 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC024060.1-201ENST00000607052 494 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.41□□□□□ -2.02
CD74P04233 AC005046.1-201ENST00000608515 625 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC103798.2-201ENST00000624292 632 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC091925.2-201ENST00000625059 256 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.41□□□□□ -2.02
CD74P04233 CYP3A51P-201ENST00000633513 256 ntBASIC2.41□□□□□ -2.02
CD74P04233 AC009487.2-201ENST00000420969 6821 ntBASIC2.41□□□□□ -2.02
CD74P04233 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.41□□□□□ -2.02
CD74P04233 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
CD74P04233 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CD74P04233 MTCO1P23-201ENST00000415223 1526 ntBASIC2.41□□□□□ -2.02
CD74P04233 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CD74P04233 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.41□□□□□ -2.02
CD74P04233 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CD74P04233 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CD74P04233 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CD74P04233 NACA3P-201ENST00000359690 648 ntBASIC2.4□□□□□ -2.03
CD74P04233 Y_RNA.25-201ENST00000362528 102 ntBASIC2.4□□□□□ -2.03
CD74P04233 SNORA54-201ENST00000384281 123 ntBASIC2.4□□□□□ -2.03
CD74P04233 SNORD116-12-201ENST00000384468 92 ntBASIC2.4□□□□□ -2.03
CD74P04233 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CD74P04233 RNU2-15P-201ENST00000410692 191 ntBASIC2.4□□□□□ -2.03
CD74P04233 AL353678.1-201ENST00000422735 741 ntBASIC2.4□□□□□ -2.03
CD74P04233 RPF2P1-201ENST00000424137 906 ntBASIC2.4□□□□□ -2.03
CD74P04233 AL513043.1-201ENST00000439124 535 ntBASIC2.4□□□□□ -2.03
CD74P04233 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.4□□□□□ -2.03
CD74P04233 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms