Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFAP04085 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFAP04085 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PDGFAP04085 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 RHOT1P2-201ENST00000366423 333 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 SNORA36C-201ENST00000384289 132 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 RNU1-106P-201ENST00000384382 164 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 Y_RNA.534-201ENST00000384599 112 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 MIR578-201ENST00000384828 96 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 RNA5SP296-201ENST00000410523 111 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFAP04085 AC063979.1-201ENST00000415539 377 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 USP9YP16-201ENST00000430287 407 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 AL133396.1-201ENST00000432048 687 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFAP04085 DAP3P1-201ENST00000441522 278 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFAP04085 USP9YP23-201ENST00000455085 407 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 AC011005.2-201ENST00000487324 359 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFAP04085 RNU6-927P-201ENST00000516199 100 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.18□□□□□ -1.58
PDGFAP04085 AC009643.1-201ENST00000532030 391 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFAP04085 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFAP04085 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFAP04085 MIR4436B2-201ENST00000581415 91 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 MIR4436B1-201ENST00000583272 91 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 AC012616.1-201ENST00000600294 197 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 AC008814.1-201ENST00000603797 406 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.18□□□□□ -1.58
PDGFAP04085 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.18□□□□□ -1.58
PDGFAP04085 AC099669.2-201ENST00000616549 437 ntBASIC5.18□□□□□ -1.58
PDGFAP04085 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.18□□□□□ -1.58
PDGFAP04085 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PDGFAP04085 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDGFAP04085 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFAP04085 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFAP04085 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
PDGFAP04085 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFAP04085 AC239868.2-201ENST00000564237 4527 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.17□□□□□ -1.58
PDGFAP04085 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFAP04085 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PDGFAP04085 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFAP04085 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PDGFAP04085 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFAP04085 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFAP04085 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFAP04085 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
PDGFAP04085 AL391684.1-202ENST00000641293 1636 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 RNA5SP52-201ENST00000362448 134 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 RNA5SP335-201ENST00000363817 110 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 Y_RNA.314-201ENST00000365114 102 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFAP04085 RNU6-1074P-201ENST00000383995 104 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 RNU6-784P-201ENST00000384330 106 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDGFAP04085 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDGFAP04085 AL445529.1-201ENST00000398713 389 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AL080315.1-201ENST00000406055 466 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 RNU6-607P-201ENST00000411283 108 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 RPL37P18-201ENST00000411602 243 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFAP04085 MRPS18CP6-201ENST00000423587 223 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFAP04085 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFAP04085 RPL26P6-201ENST00000440913 438 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFAP04085 AL353752.1-201ENST00000454946 260 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 RPS23P3-201ENST00000470993 430 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 RPS18P6-201ENST00000476880 458 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 BX284632.1-201ENST00000478218 541 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AC010655.3-201ENST00000478818 450 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.17□□□□□ -1.58
PDGFAP04085 GLUD1P3-202ENST00000508551 200 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AC008716.1-201ENST00000511084 513 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AC074255.1-201ENST00000511259 501 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFAP04085 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFAP04085 AC093227.2-201ENST00000589357 285 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFAP04085 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.17□□□□□ -1.58
PDGFAP04085 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.17□□□□□ -1.58
PDGFAP04085 AL160281.1-201ENST00000605307 311 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 SNORD58B-201ENST00000607313 66 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AL591516.1-201ENST00000611326 274 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 AL161616.1-201ENST00000611867 286 ntBASIC5.17□□□□□ -1.58
PDGFAP04085 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFAP04085 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDGFAP04085 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms