Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 SNORD116-2-201ENST00000384274 95 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 SNORD116-6-201ENST00000384711 96 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AL354719.1-201ENST00000406535 843 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 FAT1P1-201ENST00000406588 507 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 U3.42-201ENST00000408746 214 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 CYCSP19-201ENST00000411715 316 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.08□□□□□ -1.92
MT-ND1P03886 MTATP6P4-201ENST00000427725 675 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 MTND4P6-201ENST00000438297 472 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.08□□□□□ -1.92
MT-ND1P03886 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.08□□□□□ -1.92
MT-ND1P03886 RNA5SP310-201ENST00000459084 116 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 MEMO1P3-201ENST00000459811 302 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.08□□□□□ -1.92
MT-ND1P03886 RPL31P50-201ENST00000471002 296 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 MTND3P7-201ENST00000474435 343 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AC068587.1-201ENST00000483613 781 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.08□□□□□ -1.92
MT-ND1P03886 CBX3P3-201ENST00000508108 532 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AC104619.4-201ENST00000510773 249 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.08□□□□□ -1.92
MT-ND1P03886 Y_RNA.688-201ENST00000516565 95 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 HSPA8P13-201ENST00000523715 472 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
MT-ND1P03886 CR383656.7-201ENST00000548164 174 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.08□□□□□ -1.92
MT-ND1P03886 GTF2IP22-201ENST00000554443 182 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.08□□□□□ -1.92
MT-ND1P03886 AC015917.1-201ENST00000579654 510 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.08□□□□□ -1.92
MT-ND1P03886 AC099778.2-201ENST00000610904 211 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AC122133.1-201ENST00000613964 233 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 AC004009.2-201ENST00000623016 728 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 PCMTD1P7-201ENST00000634506 357 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MT-ND1P03886 AC092326.2-201ENST00000624772 1561 ntBASIC3.08□□□□□ -1.92
MT-ND1P03886 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
MT-ND1P03886 AL356274.2-201ENST00000624379 3752 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MT-ND1P03886 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
MT-ND1P03886 RNU6-500P-201ENST00000362349 107 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 RNU6-660P-201ENST00000364566 109 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 Y_RNA.302-201ENST00000364997 102 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
MT-ND1P03886 SNORA5A-201ENST00000384111 134 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 Y_RNA.560-201ENST00000384689 102 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 RNU6-253P-201ENST00000384730 105 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 MIR1193-201ENST00000408109 78 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.07□□□□□ -1.92
MT-ND1P03886 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.07□□□□□ -1.92
MT-ND1P03886 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MT-ND1P03886 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.07□□□□□ -1.92
MT-ND1P03886 ATP5JP1-201ENST00000431631 322 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 MTND5P14-201ENST00000441481 1267 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 UBE2D3P4-201ENST00000441973 436 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.07□□□□□ -1.92
MT-ND1P03886 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.07□□□□□ -1.92
MT-ND1P03886 BX322784.1-201ENST00000455793 1077 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.07□□□□□ -1.92
MT-ND1P03886 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 RPS4XP10-201ENST00000465034 731 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 RPL30P9-201ENST00000465586 330 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.07□□□□□ -1.92
MT-ND1P03886 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MT-ND1P03886 RPF2P2-201ENST00000504693 896 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.07□□□□□ -1.92
MT-ND1P03886 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MT-ND1P03886 AC005178.1-201ENST00000508392 440 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.07□□□□□ -1.92
MT-ND1P03886 SNORA31.1-201ENST00000515993 133 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 SNORA31.5-201ENST00000516190 133 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
MT-ND1P03886 MTCO1P49-201ENST00000523429 802 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.07□□□□□ -1.92
MT-ND1P03886 AC024224.1-201ENST00000538284 609 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.07□□□□□ -1.92
MT-ND1P03886 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.07□□□□□ -1.92
MT-ND1P03886 AC136618.2-201ENST00000575091 400 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 MIR3915-201ENST00000578518 97 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.07□□□□□ -1.92
MT-ND1P03886 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.07□□□□□ -1.92
MT-ND1P03886 WISP1-OT1-201ENST00000602893 642 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.07□□□□□ -1.92
MT-ND1P03886 AC097065.2-201ENST00000608159 533 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 uc_338.1-201ENST00000612113 180 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.07□□□□□ -1.92
MT-ND1P03886 MIR6076-201ENST00000617521 113 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.07□□□□□ -1.92
MT-ND1P03886 MIR3974-201ENST00000637126 96 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MT-ND1P03886 AC011477.1-204ENST00000623416 1325 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 CR383658.2-201ENST00000547576 1525 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 TAB3P1-202ENST00000452645 1634 ntBASIC3.07□□□□□ -1.92
MT-ND1P03886 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MT-ND1P03886 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
MT-ND1P03886 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
MT-ND1P03886 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
MT-ND1P03886 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
MT-ND1P03886 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms