Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.08□□□□□ -1.92
MBD3O95983 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.08□□□□□ -1.92
MBD3O95983 AC112220.1-201ENST00000434628 355 ntBASIC3.08□□□□□ -1.92
MBD3O95983 RPS20P5-201ENST00000434808 360 ntBASIC3.08□□□□□ -1.92
MBD3O95983 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.08□□□□□ -1.92
MBD3O95983 AL591503.2-201ENST00000442314 1005 ntBASIC3.08□□□□□ -1.92
MBD3O95983 ARPC3P5-201ENST00000448802 534 ntBASIC3.08□□□□□ -1.92
MBD3O95983 RNA5SP310-201ENST00000459084 116 ntBASIC3.08□□□□□ -1.92
MBD3O95983 AC104472.2-201ENST00000469035 601 ntBASIC3.08□□□□□ -1.92
MBD3O95983 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
MBD3O95983 RPS3AP43-201ENST00000479743 781 ntBASIC3.08□□□□□ -1.92
MBD3O95983 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.08□□□□□ -1.92
MBD3O95983 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.08□□□□□ -1.92
MBD3O95983 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.08□□□□□ -1.92
MBD3O95983 RNU6-583P-201ENST00000516012 92 ntBASIC3.08□□□□□ -1.92
MBD3O95983 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.08□□□□□ -1.92
MBD3O95983 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.08□□□□□ -1.92
MBD3O95983 AC093227.2-201ENST00000589357 285 ntBASIC3.08□□□□□ -1.92
MBD3O95983 BNIP3P26-201ENST00000600827 554 ntBASIC3.08□□□□□ -1.92
MBD3O95983 AL162274.2-201ENST00000614406 332 ntBASIC3.08□□□□□ -1.92
MBD3O95983 U6.105-201ENST00000637379 88 ntBASIC3.08□□□□□ -1.92
MBD3O95983 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.08□□□□□ -1.92
MBD3O95983 LINC02211-204ENST00000642024 1070 ntBASIC3.08□□□□□ -1.92
MBD3O95983 AC000403.1-201ENST00000613696 3585 ntBASIC3.08□□□□□ -1.92
MBD3O95983 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MBD3O95983 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.07□□□□□ -1.92
MBD3O95983 AL079343.1-201ENST00000572358 1771 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AC009812.4-201ENST00000569134 1805 ntBASIC3.07□□□□□ -1.92
MBD3O95983 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
MBD3O95983 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.07□□□□□ -1.92
MBD3O95983 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.07□□□□□ -1.92
MBD3O95983 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MBD3O95983 RNU6-560P-201ENST00000364007 108 ntBASIC3.07□□□□□ -1.92
MBD3O95983 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
MBD3O95983 SNORA1.3-201ENST00000384676 136 ntBASIC3.07□□□□□ -1.92
MBD3O95983 RNA5SP210-201ENST00000391034 120 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AL139095.1-201ENST00000404326 391 ntBASIC3.07□□□□□ -1.92
MBD3O95983 RNU2-47P-201ENST00000410649 186 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AL096701.2-201ENST00000416920 238 ntBASIC3.07□□□□□ -1.92
MBD3O95983 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.07□□□□□ -1.92
MBD3O95983 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.07□□□□□ -1.92
MBD3O95983 USP9YP36-201ENST00000424581 829 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.07□□□□□ -1.92
MBD3O95983 RPS12P2-201ENST00000439728 269 ntBASIC3.07□□□□□ -1.92
MBD3O95983 RPL18AP17-201ENST00000455326 198 ntBASIC3.07□□□□□ -1.92
MBD3O95983 KC877373.1-201ENST00000479066 408 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.07□□□□□ -1.92
MBD3O95983 TMEM251P1-201ENST00000503717 318 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.07□□□□□ -1.92
MBD3O95983 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.07□□□□□ -1.92
MBD3O95983 SNORA31.1-201ENST00000515993 133 ntBASIC3.07□□□□□ -1.92
MBD3O95983 SNORA31.5-201ENST00000516190 133 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AC091163.3-201ENST00000518269 1144 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AC022861.1-201ENST00000522981 663 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AP001804.3-201ENST00000525146 880 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.07□□□□□ -1.92
MBD3O95983 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.07□□□□□ -1.92
MBD3O95983 MIR5092-201ENST00000583139 88 ntBASIC3.07□□□□□ -1.92
MBD3O95983 MIR4635-201ENST00000583759 79 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.07□□□□□ -1.92
MBD3O95983 VN1R78P-201ENST00000597393 564 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AC004987.4-201ENST00000603383 338 ntBASIC3.07□□□□□ -1.92
MBD3O95983 MIR6076-201ENST00000617521 113 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.07□□□□□ -1.92
MBD3O95983 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.07□□□□□ -1.92
MBD3O95983 AC005539.1-201ENST00000443768 1479 ntBASIC3.07□□□□□ -1.92
MBD3O95983 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MBD3O95983 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
MBD3O95983 DEFB108F-201ENST00000344638 222 ntBASIC3.06□□□□□ -1.92
MBD3O95983 CD24P4-201ENST00000382840 243 ntBASIC3.06□□□□□ -1.92
MBD3O95983 RNU6-1122P-201ENST00000384449 107 ntBASIC3.06□□□□□ -1.92
MBD3O95983 MIR183-201ENST00000384958 110 ntBASIC3.06□□□□□ -1.92
MBD3O95983 AC068533.2-201ENST00000411872 306 ntBASIC3.06□□□□□ -1.92
MBD3O95983 SSXP9-201ENST00000417503 292 ntBASIC3.06□□□□□ -1.92
MBD3O95983 RPL36AP36-201ENST00000418616 301 ntBASIC3.06□□□□□ -1.92
MBD3O95983 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.06□□□□□ -1.92
MBD3O95983 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MBD3O95983 CACYBPP2-201ENST00000453625 678 ntBASIC3.06□□□□□ -1.92
MBD3O95983 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.06□□□□□ -1.92
MBD3O95983 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MBD3O95983 AC096571.1-202ENST00000506634 735 ntBASIC3.06□□□□□ -1.92
MBD3O95983 AC114322.1-201ENST00000506771 926 ntBASIC3.06□□□□□ -1.92
MBD3O95983 AC022483.1-201ENST00000514020 567 ntBASIC3.06□□□□□ -1.92
MBD3O95983 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.06□□□□□ -1.92
MBD3O95983 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
MBD3O95983 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.06□□□□□ -1.92
MBD3O95983 DEFB108D-201ENST00000527787 222 ntBASIC3.06□□□□□ -1.92
MBD3O95983 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.06□□□□□ -1.92
MBD3O95983 H3F3AP1-201ENST00000559984 334 ntBASIC3.06□□□□□ -1.92
MBD3O95983 AL132657.2-201ENST00000564417 358 ntBASIC3.06□□□□□ -1.92
MBD3O95983 AC103988.1-201ENST00000566382 2177 ntBASIC3.06□□□□□ -1.92
MBD3O95983 MTND3P13-201ENST00000574391 343 ntBASIC3.06□□□□□ -1.92
MBD3O95983 MIR3921-201ENST00000577308 85 ntBASIC3.06□□□□□ -1.92
MBD3O95983 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.06□□□□□ -1.92
MBD3O95983 AC015688.2-201ENST00000584523 262 ntBASIC3.06□□□□□ -1.92
MBD3O95983 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.06□□□□□ -1.92
MBD3O95983 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.06□□□□□ -1.92
MBD3O95983 BNIP3P27-201ENST00000599991 412 ntBASIC3.06□□□□□ -1.92
MBD3O95983 AC006539.2-201ENST00000601729 572 ntBASIC3.06□□□□□ -1.92
MBD3O95983 DUXAP11-201ENST00000603858 526 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms