Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.45□□□□□ -1.7
CNOT4O95628 ST13P14-201ENST00000474095 734 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNOT4O95628 AC126389.1-201ENST00000477436 290 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.45□□□□□ -1.7
CNOT4O95628 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CNOT4O95628 AC140172.1-201ENST00000502928 141 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 AC005921.1-201ENST00000510589 286 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.45□□□□□ -1.7
CNOT4O95628 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.45□□□□□ -1.7
CNOT4O95628 RNA5SP43-201ENST00000516559 110 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 AP001804.3-201ENST00000525146 880 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.45□□□□□ -1.7
CNOT4O95628 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.45□□□□□ -1.7
CNOT4O95628 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.45□□□□□ -1.7
CNOT4O95628 MIR4691-201ENST00000583764 85 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 AC008782.1-201ENST00000603386 430 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 AC105254.2-201ENST00000603636 436 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 AC245389.1-201ENST00000605141 529 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.45□□□□□ -1.7
CNOT4O95628 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNOT4O95628 AC245517.5-201ENST00000611529 162 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.45□□□□□ -1.7
CNOT4O95628 AL627230.1-201ENST00000613077 211 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 AL591926.8-201ENST00000616876 211 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 MIR7641-1-201ENST00000627518 61 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.45□□□□□ -1.7
CNOT4O95628 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNOT4O95628 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CNOT4O95628 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNOT4O95628 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNOT4O95628 AP001642.1-201ENST00000624727 2117 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 MAPK10-263ENST00000641052 4307 ntBASIC4.45□□□□□ -1.7
CNOT4O95628 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CNOT4O95628 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.45□□□□□ -1.7
CNOT4O95628 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.44□□□□□ -1.7
CNOT4O95628 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CNOT4O95628 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.44□□□□□ -1.7
CNOT4O95628 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNOT4O95628 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.44□□□□□ -1.7
CNOT4O95628 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.44□□□□□ -1.7
CNOT4O95628 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CNOT4O95628 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CNOT4O95628 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CNOT4O95628 RNU6-1249P-201ENST00000363237 111 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 Y_RNA.197-201ENST00000364004 102 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 U3.11-201ENST00000364476 212 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 RNA5SP428-201ENST00000365129 132 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 RNU6-1105P-201ENST00000384774 107 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 MTCYBP4-201ENST00000401524 249 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AL356057.3-201ENST00000402607 340 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 RNU2-29P-201ENST00000410423 189 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 OR6C66P-201ENST00000414917 930 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.44□□□□□ -1.7
CNOT4O95628 AL590139.1-201ENST00000416267 400 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC068287.1-201ENST00000430283 295 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC091390.1-201ENST00000433904 331 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.44□□□□□ -1.7
CNOT4O95628 CYCSP24-201ENST00000445119 316 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC107399.1-201ENST00000451226 265 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC108059.3-201ENST00000456388 214 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 RNU7-66P-201ENST00000459469 62 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.44□□□□□ -1.7
CNOT4O95628 AC083904.1-201ENST00000487828 231 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC008897.1-201ENST00000494006 347 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC092436.1-201ENST00000506450 503 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 RNU6-27P-201ENST00000516146 107 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 Y_RNA.682-201ENST00000516457 100 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CNOT4O95628 AC018630.1-201ENST00000541376 925 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.44□□□□□ -1.7
CNOT4O95628 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.44□□□□□ -1.7
CNOT4O95628 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.44□□□□□ -1.7
CNOT4O95628 MIR4775-201ENST00000581168 75 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 MIR3668-201ENST00000582138 75 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 MIR4424-201ENST00000585257 86 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC006006.1-201ENST00000603082 144 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 CYP2C61P-201ENST00000604072 290 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.44□□□□□ -1.7
CNOT4O95628 AC103710.2-201ENST00000609912 942 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AL161616.1-201ENST00000611867 286 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AL049794.2-201ENST00000616301 365 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 AC087385.3-201ENST00000620477 187 ntBASIC4.44□□□□□ -1.7
CNOT4O95628 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.44□□□□□ -1.7
CNOT4O95628 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CNOT4O95628 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CNOT4O95628 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNOT4O95628 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.44□□□□□ -1.7
CNOT4O95628 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CNOT4O95628 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.44□□□□□ -1.7
CNOT4O95628 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CNOT4O95628 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CNOT4O95628 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.43□□□□□ -1.7
CNOT4O95628 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CNOT4O95628 RNU6-335P-201ENST00000364563 113 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CNOT4O95628 RNU6-641P-201ENST00000384006 107 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 RNA5SP87-201ENST00000384155 118 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 RNU6-196P-201ENST00000384315 107 ntBASIC4.43□□□□□ -1.7
CNOT4O95628 MIR19A-201ENST00000384878 82 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms