Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 FABP5P6-201ENST00000510588 409 ntBASIC2.49□□□□□ -2.01
POLR1AO95602 SNHG22-203ENST00000617833 660 ntBASIC2.49□□□□□ -2.01
POLR1AO95602 MTND4P23-201ENST00000447723 1363 ntBASIC2.49□□□□□ -2.01
POLR1AO95602 RNA5SP489-201ENST00000410986 109 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 POLHP1-201ENST00000411806 470 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 AC027124.2-201ENST00000428249 105 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 AC007115.1-201ENST00000546853 234 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 AC121758.2-201ENST00000553271 193 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 MIR4421-201ENST00000578133 69 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 MIR3199-1-201ENST00000582434 88 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 AL133393.1-201ENST00000603277 287 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
POLR1AO95602 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.48□□□□□ -2.01
POLR1AO95602 RPL37P25-201ENST00000507308 276 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.48□□□□□ -2.01
POLR1AO95602 RNA5SP364-201ENST00000516938 78 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 RNU6-56P-201ENST00000516986 93 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 AC024560.3-201ENST00000608482 349 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.48□□□□□ -2.01
POLR1AO95602 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.47□□□□□ -2.01
POLR1AO95602 RNA5SP393-201ENST00000363423 117 ntBASIC2.47□□□□□ -2.01
POLR1AO95602 AC073264.1-201ENST00000411508 416 ntBASIC2.47□□□□□ -2.01
POLR1AO95602 AC109780.2-201ENST00000413467 845 ntBASIC2.47□□□□□ -2.01
POLR1AO95602 AC011979.1-201ENST00000472300 483 ntBASIC2.47□□□□□ -2.01
POLR1AO95602 RPL21P93-201ENST00000480465 489 ntBASIC2.47□□□□□ -2.01
POLR1AO95602 AC233702.1-201ENST00000482905 502 ntBASIC2.47□□□□□ -2.01
POLR1AO95602 AC093591.1-201ENST00000491435 481 ntBASIC2.47□□□□□ -2.01
POLR1AO95602 AC109464.2-201ENST00000510242 943 ntBASIC2.47□□□□□ -2.01
POLR1AO95602 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.47□□□□□ -2.01
POLR1AO95602 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
POLR1AO95602 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
POLR1AO95602 SUMO1P4-201ENST00000429430 302 ntBASIC2.46□□□□□ -2.02
POLR1AO95602 ARPC3P1-201ENST00000437218 533 ntBASIC2.46□□□□□ -2.02
POLR1AO95602 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.46□□□□□ -2.02
POLR1AO95602 AC092754.2-201ENST00000463506 460 ntBASIC2.46□□□□□ -2.02
POLR1AO95602 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.46□□□□□ -2.02
POLR1AO95602 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.46□□□□□ -2.02
POLR1AO95602 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
POLR1AO95602 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
POLR1AO95602 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.46□□□□□ -2.02
POLR1AO95602 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.45□□□□□ -2.02
POLR1AO95602 Y_RNA.327-201ENST00000365201 102 ntBASIC2.45□□□□□ -2.02
POLR1AO95602 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.45□□□□□ -2.02
POLR1AO95602 AL358075.3-201ENST00000426289 226 ntBASIC2.45□□□□□ -2.02
POLR1AO95602 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.45□□□□□ -2.02
POLR1AO95602 TPT1P14-201ENST00000448018 505 ntBASIC2.45□□□□□ -2.02
POLR1AO95602 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.45□□□□□ -2.02
POLR1AO95602 HSPE1P20-201ENST00000538133 289 ntBASIC2.45□□□□□ -2.02
POLR1AO95602 AC024614.2-201ENST00000577584 372 ntBASIC2.45□□□□□ -2.02
POLR1AO95602 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
POLR1AO95602 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
POLR1AO95602 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
POLR1AO95602 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
POLR1AO95602 RNU4-13P-201ENST00000364019 141 ntBASIC2.45□□□□□ -2.02
POLR1AO95602 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.45□□□□□ -2.02
POLR1AO95602 AC017099.1-201ENST00000448261 1028 ntBASIC2.45□□□□□ -2.02
POLR1AO95602 AC090453.1-201ENST00000495560 436 ntBASIC2.45□□□□□ -2.02
POLR1AO95602 AC135721.1-201ENST00000497954 479 ntBASIC2.45□□□□□ -2.02
POLR1AO95602 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.45□□□□□ -2.02
POLR1AO95602 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
POLR1AO95602 AC008568.2-201ENST00000623862 2313 ntBASIC2.44□□□□□ -2.02
POLR1AO95602 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.44□□□□□ -2.02
POLR1AO95602 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.44□□□□□ -2.02
POLR1AO95602 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.44□□□□□ -2.02
POLR1AO95602 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.44□□□□□ -2.02
POLR1AO95602 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.44□□□□□ -2.02
POLR1AO95602 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.44□□□□□ -2.02
POLR1AO95602 USP9YP10-201ENST00000454868 628 ntBASIC2.44□□□□□ -2.02
POLR1AO95602 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.44□□□□□ -2.02
POLR1AO95602 AL161670.1-201ENST00000554348 137 ntBASIC2.44□□□□□ -2.02
POLR1AO95602 AL359740.1-201ENST00000624340 592 ntBASIC2.44□□□□□ -2.02
POLR1AO95602 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
POLR1AO95602 RNA5SP27-201ENST00000363839 119 ntBASIC2.43□□□□□ -2.02
POLR1AO95602 SNORD48-201ENST00000364953 64 ntBASIC2.43□□□□□ -2.02
POLR1AO95602 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
POLR1AO95602 RNU6-1027P-201ENST00000383998 107 ntBASIC2.43□□□□□ -2.02
POLR1AO95602 AC013404.1-201ENST00000413068 249 ntBASIC2.43□□□□□ -2.02
POLR1AO95602 PAICSP7-201ENST00000419829 962 ntBASIC2.43□□□□□ -2.02
POLR1AO95602 PTP4A1P1-201ENST00000420539 515 ntBASIC2.43□□□□□ -2.02
POLR1AO95602 USP9YP15-201ENST00000442391 422 ntBASIC2.43□□□□□ -2.02
POLR1AO95602 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.43□□□□□ -2.02
POLR1AO95602 AC022790.1-201ENST00000522872 204 ntBASIC2.43□□□□□ -2.02
POLR1AO95602 MIR5694-201ENST00000581190 76 ntBASIC2.43□□□□□ -2.02
POLR1AO95602 SNORA7.1-201ENST00000363750 139 ntBASIC2.42□□□□□ -2.02
POLR1AO95602 RPS3AP9-201ENST00000417027 792 ntBASIC2.42□□□□□ -2.02
POLR1AO95602 AC114973.1-201ENST00000429057 632 ntBASIC2.42□□□□□ -2.02
POLR1AO95602 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.42□□□□□ -2.02
POLR1AO95602 UBE2V1P5-201ENST00000440070 405 ntBASIC2.42□□□□□ -2.02
POLR1AO95602 AL353093.1-201ENST00000441292 436 ntBASIC2.42□□□□□ -2.02
POLR1AO95602 AC239798.3-201ENST00000454459 408 ntBASIC2.42□□□□□ -2.02
POLR1AO95602 AMD1P1-201ENST00000457220 922 ntBASIC2.42□□□□□ -2.02
POLR1AO95602 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.42□□□□□ -2.02
POLR1AO95602 AC079203.1-201ENST00000487972 404 ntBASIC2.42□□□□□ -2.02
POLR1AO95602 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.42□□□□□ -2.02
POLR1AO95602 MTCYBP37-201ENST00000510642 1133 ntBASIC2.42□□□□□ -2.02
POLR1AO95602 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.42□□□□□ -2.02
POLR1AO95602 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.42□□□□□ -2.02
POLR1AO95602 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
POLR1AO95602 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
POLR1AO95602 SNORD114-26-201ENST00000363543 72 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms