Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 ZNF734P-201ENST00000419494 1534 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AL365361.1-201ENST00000566942 3481 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 MT-TC-201ENST00000387405 66 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AL591416.1-201ENST00000404015 867 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 U3.37-201ENST00000408528 213 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 BTF3P8-201ENST00000414577 526 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 RPL7P10-201ENST00000417407 739 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 NANOGP5-201ENST00000424456 877 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 COX6CP18-201ENST00000448769 222 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AL445669.2-201ENST00000454425 421 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 OR6K1P-201ENST00000456766 971 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC119751.4-201ENST00000507498 357 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AP003385.6-201ENST00000531603 374 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 BPTFP1-201ENST00000579209 492 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC113368.1-201ENST00000603736 382 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AP000238.1-201ENST00000608759 426 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AL121652.1-201ENST00000608851 448 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 RNU6-1192P-201ENST00000612197 107 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 VN1R74P-201ENST00000613259 503 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 AC006213.4-201ENST00000616184 634 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 RNU6-489P-201ENST00000618289 107 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 AL391262.2-201ENST00000622466 494 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.73□□□□□ -1.97
CTDNEP1O95476 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
CTDNEP1O95476 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.73□□□□□ -1.97
CTDNEP1O95476 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 RNA5SP289-201ENST00000362332 137 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 RNU5E-10P-201ENST00000363506 118 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 RNU6-236P-201ENST00000363886 106 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 RNU6-374P-201ENST00000364146 108 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 RPL7P27-201ENST00000403775 720 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 RN7SKP140-201ENST00000411196 284 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 USP9YP36-201ENST00000424581 829 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 RPP40P1-201ENST00000426762 456 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 RPS15AP28-201ENST00000435088 386 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC104389.3-201ENST00000445629 235 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC027673.1-201ENST00000456245 405 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 LINC00888-204ENST00000487386 421 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC234781.5-201ENST00000508429 271 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC118282.2-201ENST00000508739 374 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 MTATP6P9-201ENST00000515039 680 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 snoZ278.1-201ENST00000517059 112 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 RNA5SP402-201ENST00000517148 110 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 RNU6-1028P-201ENST00000517164 93 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC104417.1-201ENST00000523974 751 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 NDUFS5P6-201ENST00000529136 295 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 MIR4666A-201ENST00000580160 79 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC097504.2-201ENST00000608088 454 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AL110115.1-201ENST00000614396 364 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC007998.5-201ENST00000622938 237 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AC104985.3-201ENST00000623479 597 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AP000676.4-201ENST00000624659 623 ntBASIC2.72□□□□□ -1.97
CTDNEP1O95476 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.72□□□□□ -1.97
CTDNEP1O95476 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 RNU6-525P-201ENST00000363685 104 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CTDNEP1O95476 XGY1-201ENST00000381172 446 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 RNU1-138P-201ENST00000384093 164 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 Y_RNA.510-201ENST00000384511 114 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 SSXP10-201ENST00000402595 565 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 RNA5SP56-201ENST00000410277 118 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 RAD23BP2-201ENST00000416003 1207 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 AL449283.1-202ENST00000418249 604 ntBASIC2.71□□□□□ -1.98
CTDNEP1O95476 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms