Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 Y_RNA.675-201ENST00000516389 149 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 AC022882.1-201ENST00000532142 501 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 AC069240.1-201ENST00000548774 375 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 AC025627.2-201ENST00000576220 160 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 AC135507.2-201ENST00000612443 309 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 ZYXP1-201ENST00000617638 118 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 AC112204.3-201ENST00000623822 332 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 MIR6715B-201ENST00000637172 77 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
VAMP4O75379 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP4O75379 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP4O75379 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP4O75379 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP4O75379 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
VAMP4O75379 AC011266.1-201ENST00000624119 3569 ntBASIC5.2□□□□□ -1.58
VAMP4O75379 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP4O75379 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP4O75379 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
VAMP4O75379 AC011460.1-201ENST00000636268 1834 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP4O75379 SPRR2C-201ENST00000290702 219 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 Y_RNA.234-201ENST00000364409 97 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 RNY4P16-201ENST00000364768 94 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 SNORD81.2-201ENST00000365153 76 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 RNA5SP283-201ENST00000365604 119 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 Y_RNA.460-201ENST00000384255 102 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 U3.20-201ENST00000390909 217 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 AL354719.1-201ENST00000406535 843 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 RNU2-21P-201ENST00000410368 188 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP4O75379 PDCL2P1-201ENST00000419302 352 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP4O75379 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.19□□□□□ -1.58
VAMP4O75379 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP4O75379 AL117339.2-201ENST00000430475 180 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP4O75379 RPS15AP9-201ENST00000439856 381 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP4O75379 CBWD4P-201ENST00000445695 655 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 RPL7P52-201ENST00000449200 742 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP4O75379 AC093278.1-201ENST00000494700 600 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP4O75379 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP4O75379 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP4O75379 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP4O75379 RNA5SP337-201ENST00000517007 109 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.19□□□□□ -1.58
VAMP4O75379 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP4O75379 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP4O75379 YPEL5P3-201ENST00000547227 352 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.19□□□□□ -1.58
VAMP4O75379 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.19□□□□□ -1.58
VAMP4O75379 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.19□□□□□ -1.58
VAMP4O75379 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.19□□□□□ -1.58
VAMP4O75379 MIR4795-201ENST00000584182 89 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 UBE2L4-201ENST00000587688 464 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 AC068790.3-201ENST00000602988 553 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 AL442067.2-201ENST00000614033 363 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 AL157700.1-201ENST00000561973 1432 ntBASIC5.19□□□□□ -1.58
VAMP4O75379 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP4O75379 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.19□□□□□ -1.58
VAMP4O75379 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP4O75379 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
VAMP4O75379 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP4O75379 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
VAMP4O75379 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP4O75379 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.19□□□□□ -1.58
VAMP4O75379 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
VAMP4O75379 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP4O75379 AC009902.3-201ENST00000606235 2172 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.18□□□□□ -1.58
VAMP4O75379 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
VAMP4O75379 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP4O75379 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VAMP4O75379 SNORA60-201ENST00000362396 134 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 RNU6-223P-201ENST00000362830 107 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 MIR513A2-201ENST00000385249 127 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 RPL21P65-201ENST00000406094 466 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 RNU6-1068P-201ENST00000410958 103 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.18□□□□□ -1.58
VAMP4O75379 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.18□□□□□ -1.58
VAMP4O75379 AC007283.2-201ENST00000424739 197 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 EZH2P1-201ENST00000431167 291 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 RPL36AP53-201ENST00000432891 316 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.18□□□□□ -1.58
VAMP4O75379 UBE2V1P13-201ENST00000436983 439 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VAMP4O75379 BNIP3P2-201ENST00000441221 577 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 HSFY6P-201ENST00000445573 403 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.18□□□□□ -1.58
VAMP4O75379 AL356010.1-201ENST00000456364 102 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.18□□□□□ -1.58
VAMP4O75379 RPL29P14-201ENST00000495837 428 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.18□□□□□ -1.58
VAMP4O75379 FTH1P21-201ENST00000512179 511 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 RNU6-1220P-201ENST00000517126 108 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 IGKV2-38-201ENST00000517443 247 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 OR4R1P-201ENST00000529879 463 ntBASIC5.18□□□□□ -1.58
VAMP4O75379 OR5B19P-201ENST00000531766 928 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms