Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 Y_RNA.693-201ENST00000516641 110 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.26□□□□□ -1.57
SMARCA5O60264 HPRT1P3-201ENST00000539521 576 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 AC135001.1-201ENST00000544546 283 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.26□□□□□ -1.57
SMARCA5O60264 AL512360.1-201ENST00000555346 234 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.26□□□□□ -1.57
SMARCA5O60264 AC025678.1-201ENST00000567861 338 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 MIR3690-201ENST00000580266 75 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.26□□□□□ -1.57
SMARCA5O60264 AC012443.1-201ENST00000605605 231 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 AC093788.1-201ENST00000609356 927 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 AL355810.1-201ENST00000614629 552 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 AC004825.2-201ENST00000616634 455 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 AL159972.1-201ENST00000625150 448 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 AC110994.2-201ENST00000635481 492 ntBASIC5.26□□□□□ -1.57
SMARCA5O60264 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMARCA5O60264 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
SMARCA5O60264 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SMARCA5O60264 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SMARCA5O60264 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SMARCA5O60264 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.26□□□□□ -1.57
SMARCA5O60264 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.26□□□□□ -1.57
SMARCA5O60264 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SMARCA5O60264 LINC01355-201ENST00000566551 5444 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMARCA5O60264 MAPK10-286ENST00000641208 8747 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 Y_RNA.46-201ENST00000362695 102 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 RNU1-14P-201ENST00000362759 152 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 RNY4P34-201ENST00000364779 95 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA5O60264 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SMARCA5O60264 Y_RNA.394-201ENST00000383942 103 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 RPL7P25-201ENST00000404151 721 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 RPS4XP9-201ENST00000405151 780 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 Y_RNA.608-201ENST00000410647 95 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 AL161631.1-201ENST00000417933 486 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.25□□□□□ -1.57
SMARCA5O60264 AL353777.1-201ENST00000425552 326 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 HLA-N-201ENST00000437516 135 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 RABEPKP1-201ENST00000440529 1026 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA5O60264 MTND1P18-201ENST00000448191 573 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 AC023598.1-201ENST00000472521 361 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA5O60264 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SMARCA5O60264 RNA5SP309-201ENST00000516670 106 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA5O60264 AP000907.2-201ENST00000530827 353 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 AP003122.4-201ENST00000530980 758 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.25□□□□□ -1.57
SMARCA5O60264 CBX3P5-201ENST00000552017 521 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SMARCA5O60264 AC007424.1-203ENST00000554613 687 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.25□□□□□ -1.57
SMARCA5O60264 AL391646.1-201ENST00000603860 190 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.25□□□□□ -1.57
SMARCA5O60264 AC067931.1-201ENST00000624190 671 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 MIR7641-1-201ENST00000627518 61 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.25□□□□□ -1.57
SMARCA5O60264 AC105074.1-201ENST00000623380 3095 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 AC138915.3-201ENST00000562908 1389 ntBASIC5.25□□□□□ -1.57
SMARCA5O60264 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.25□□□□□ -1.57
SMARCA5O60264 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.25□□□□□ -1.57
SMARCA5O60264 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.24□□□□□ -1.57
SMARCA5O60264 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMARCA5O60264 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SMARCA5O60264 AL138713.1-201ENST00000624026 2130 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.24□□□□□ -1.57
SMARCA5O60264 AL133383.2-201ENST00000622958 2336 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.24□□□□□ -1.57
SMARCA5O60264 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SMARCA5O60264 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.24□□□□□ -1.57
SMARCA5O60264 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.24□□□□□ -1.57
SMARCA5O60264 Y_RNA.1-201ENST00000352915 104 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 U8.3-201ENST00000363321 132 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SMARCA5O60264 RPS20P2-201ENST00000402520 389 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SMARCA5O60264 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.24□□□□□ -1.57
SMARCA5O60264 RNU2-37P-201ENST00000410695 177 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 RN7SKP216-201ENST00000411050 312 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SMARCA5O60264 AC007390.1-201ENST00000415722 356 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 RPS23P10-201ENST00000416185 486 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 AF228730.4-201ENST00000421457 183 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 RPL18P10-201ENST00000425606 538 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.24□□□□□ -1.57
SMARCA5O60264 RPL23AP31-201ENST00000456160 467 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 AF213884.1-201ENST00000488102 463 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 RPL23AP55-201ENST00000498163 452 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 KCTD9P5-201ENST00000504141 1170 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 AC008958.1-201ENST00000511047 682 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.24□□□□□ -1.57
SMARCA5O60264 HMGB1P19-201ENST00000517578 577 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.24□□□□□ -1.57
SMARCA5O60264 SNRPGP16-201ENST00000533275 226 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.24□□□□□ -1.57
SMARCA5O60264 ARL2BPP2-201ENST00000550907 489 ntBASIC5.24□□□□□ -1.57
SMARCA5O60264 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms