Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL157394.1-201ENST00000562983 1224 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC034268.2-201ENST00000571784 482 ntBASIC3.37□□□□□ -1.87
PRKNO60260 BNIP3P22-201ENST00000593399 556 ntBASIC3.37□□□□□ -1.87
PRKNO60260 LLPHP1-201ENST00000603571 367 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC004853.1-201ENST00000604902 698 ntBASIC3.37□□□□□ -1.87
PRKNO60260 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.37□□□□□ -1.87
PRKNO60260 AC013476.2-201ENST00000614456 459 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AL713922.2-201ENST00000619384 716 ntBASIC3.37□□□□□ -1.87
PRKNO60260 U4.6-201ENST00000621618 127 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC099654.13-201ENST00000639774 207 ntBASIC3.37□□□□□ -1.87
PRKNO60260 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.37□□□□□ -1.87
PRKNO60260 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.37□□□□□ -1.87
PRKNO60260 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.37□□□□□ -1.87
PRKNO60260 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PRKNO60260 AL161912.2-201ENST00000565707 3007 ntBASIC3.36□□□□□ -1.87
PRKNO60260 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.36□□□□□ -1.87
PRKNO60260 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PRKNO60260 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.36□□□□□ -1.87
PRKNO60260 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 NCAPGP1-201ENST00000505112 1814 ntBASIC3.36□□□□□ -1.87
PRKNO60260 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 RNY4P24-201ENST00000362735 96 ntBASIC3.36□□□□□ -1.87
PRKNO60260 RNU6-259P-201ENST00000383999 107 ntBASIC3.36□□□□□ -1.87
PRKNO60260 RNU6-517P-201ENST00000384362 110 ntBASIC3.36□□□□□ -1.87
PRKNO60260 HMGN2P8-201ENST00000391458 268 ntBASIC3.36□□□□□ -1.87
PRKNO60260 FCF1P10-201ENST00000407590 479 ntBASIC3.36□□□□□ -1.87
PRKNO60260 RNU4-78P-201ENST00000410940 126 ntBASIC3.36□□□□□ -1.87
PRKNO60260 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 ELOCP17-201ENST00000414751 326 ntBASIC3.36□□□□□ -1.87
PRKNO60260 SPA17P1-201ENST00000416656 452 ntBASIC3.36□□□□□ -1.87
PRKNO60260 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.36□□□□□ -1.87
PRKNO60260 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.36□□□□□ -1.87
PRKNO60260 HMGN2P31-201ENST00000432430 273 ntBASIC3.36□□□□□ -1.87
PRKNO60260 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.36□□□□□ -1.87
PRKNO60260 AF228730.2-201ENST00000438784 848 ntBASIC3.36□□□□□ -1.87
PRKNO60260 PGBD4P3-201ENST00000440731 581 ntBASIC3.36□□□□□ -1.87
PRKNO60260 RPL23AP33-201ENST00000442301 452 ntBASIC3.36□□□□□ -1.87
PRKNO60260 MTND6P13-201ENST00000443510 523 ntBASIC3.36□□□□□ -1.87
PRKNO60260 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 AL590399.6-201ENST00000446396 307 ntBASIC3.36□□□□□ -1.87
PRKNO60260 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.36□□□□□ -1.87
PRKNO60260 NANOGNBP1-201ENST00000448444 480 ntBASIC3.36□□□□□ -1.87
PRKNO60260 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.36□□□□□ -1.87
PRKNO60260 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 HMGB3P30-201ENST00000457863 606 ntBASIC3.36□□□□□ -1.87
PRKNO60260 RPL7P15-201ENST00000461190 712 ntBASIC3.36□□□□□ -1.87
PRKNO60260 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.36□□□□□ -1.87
PRKNO60260 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.36□□□□□ -1.87
PRKNO60260 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 COX7A2P2-201ENST00000505291 250 ntBASIC3.36□□□□□ -1.87
PRKNO60260 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.36□□□□□ -1.87
PRKNO60260 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.36□□□□□ -1.87
PRKNO60260 AL117351.2-201ENST00000513571 157 ntBASIC3.36□□□□□ -1.87
PRKNO60260 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 RN7SKP13-201ENST00000515933 244 ntBASIC3.36□□□□□ -1.87
PRKNO60260 IGKV2D-19-201ENST00000523346 262 ntBASIC3.36□□□□□ -1.87
PRKNO60260 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.36□□□□□ -1.87
PRKNO60260 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.36□□□□□ -1.87
PRKNO60260 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.36□□□□□ -1.87
PRKNO60260 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.36□□□□□ -1.87
PRKNO60260 HMGN1P30-201ENST00000589286 268 ntBASIC3.36□□□□□ -1.87
PRKNO60260 AL359999.1-201ENST00000604513 294 ntBASIC3.36□□□□□ -1.87
PRKNO60260 AC090578.1-201ENST00000604955 591 ntBASIC3.36□□□□□ -1.87
PRKNO60260 MIR486-1-201ENST00000612171 68 ntBASIC3.36□□□□□ -1.87
PRKNO60260 AC091834.1-201ENST00000614543 472 ntBASIC3.36□□□□□ -1.87
PRKNO60260 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 AC110994.2-201ENST00000635481 492 ntBASIC3.36□□□□□ -1.87
PRKNO60260 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.36□□□□□ -1.87
PRKNO60260 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
PRKNO60260 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PRKNO60260 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
PRKNO60260 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
PRKNO60260 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.35□□□□□ -1.87
PRKNO60260 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
PRKNO60260 RNY4P34-201ENST00000364779 95 ntBASIC3.35□□□□□ -1.87
PRKNO60260 SNORD115.1-201ENST00000391109 76 ntBASIC3.35□□□□□ -1.87
PRKNO60260 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PRKNO60260 RPL7P25-201ENST00000404151 721 ntBASIC3.35□□□□□ -1.87
PRKNO60260 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.35□□□□□ -1.87
PRKNO60260 AL359704.1-201ENST00000411586 781 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AMD1P2-201ENST00000412936 992 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AC017079.2-201ENST00000416102 485 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AC245052.5-201ENST00000416320 649 ntBASIC3.35□□□□□ -1.87
PRKNO60260 AC068533.1-201ENST00000418542 415 ntBASIC3.35□□□□□ -1.87
PRKNO60260 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.35□□□□□ -1.87
PRKNO60260 AC073614.1-201ENST00000438690 650 ntBASIC3.35□□□□□ -1.87
PRKNO60260 RPL17P49-201ENST00000443728 411 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms