Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
ACTN4O43707 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ACTN4O43707 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ACTN4O43707 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
ACTN4O43707 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
ACTN4O43707 AC100757.1-201ENST00000616872 1835 ntBASIC6.23□□□□□ -1.41
ACTN4O43707 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ACTN4O43707 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
ACTN4O43707 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ACTN4O43707 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ACTN4O43707 CYCSP43-201ENST00000438233 310 ntBASIC6.23□□□□□ -1.41
ACTN4O43707 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.23□□□□□ -1.41
ACTN4O43707 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.23□□□□□ -1.41
ACTN4O43707 PIGFP3-201ENST00000441918 722 ntBASIC6.23□□□□□ -1.41
ACTN4O43707 AC087477.1-201ENST00000465747 340 ntBASIC6.23□□□□□ -1.41
ACTN4O43707 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC6.23□□□□□ -1.41
ACTN4O43707 RPL7P47-201ENST00000497299 556 ntBASIC6.23□□□□□ -1.41
ACTN4O43707 RAB9BP1-201ENST00000519581 626 ntBASIC6.23□□□□□ -1.41
ACTN4O43707 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.23□□□□□ -1.41
ACTN4O43707 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.23□□□□□ -1.41
ACTN4O43707 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.23□□□□□ -1.41
ACTN4O43707 OR1F2P-201ENST00000570470 933 ntBASIC6.23□□□□□ -1.41
ACTN4O43707 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
ACTN4O43707 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
ACTN4O43707 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.23□□□□□ -1.41
ACTN4O43707 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.23□□□□□ -1.41
ACTN4O43707 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
ACTN4O43707 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ACTN4O43707 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ACTN4O43707 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
ACTN4O43707 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
ACTN4O43707 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
ACTN4O43707 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
ACTN4O43707 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.22□□□□□ -1.41
ACTN4O43707 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ACTN4O43707 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ACTN4O43707 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ACTN4O43707 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
ACTN4O43707 MIR375-201ENST00000362103 64 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 RNY4P28-201ENST00000365281 93 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 Y_RNA.383-201ENST00000383855 97 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 RPL19P1-201ENST00000411635 428 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.22□□□□□ -1.41
ACTN4O43707 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.22□□□□□ -1.41
ACTN4O43707 RN7SL168P-201ENST00000463821 279 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.22□□□□□ -1.41
ACTN4O43707 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.22□□□□□ -1.41
ACTN4O43707 SNORA31.18-201ENST00000517043 134 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 IGLVIV-53-201ENST00000520107 367 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 AC087369.1-201ENST00000520775 996 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.22□□□□□ -1.41
ACTN4O43707 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.22□□□□□ -1.41
ACTN4O43707 AC010186.2-204ENST00000537668 439 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.22□□□□□ -1.41
ACTN4O43707 AC107958.1-201ENST00000556576 290 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.22□□□□□ -1.41
ACTN4O43707 AC067852.3-201ENST00000589177 561 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.22□□□□□ -1.41
ACTN4O43707 Y_RNA.772-201ENST00000606692 102 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ACTN4O43707 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.22□□□□□ -1.41
ACTN4O43707 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ACTN4O43707 AC144833.1-201ENST00000567953 4089 ntBASIC6.22□□□□□ -1.41
ACTN4O43707 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.22□□□□□ -1.41
ACTN4O43707 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.22□□□□□ -1.41
ACTN4O43707 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.22□□□□□ -1.41
ACTN4O43707 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
ACTN4O43707 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
ACTN4O43707 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
ACTN4O43707 Y_RNA.398-201ENST00000383952 99 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 AL033519.2-201ENST00000403958 392 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 AC140479.3-201ENST00000418944 1126 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 TMEM167AP1-201ENST00000423409 219 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.21□□□□□ -1.42
ACTN4O43707 CYCSP51-201ENST00000443545 318 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 MTND3P25-201ENST00000509243 135 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 RNU6-615P-201ENST00000516065 106 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 RNA5SP271-201ENST00000516700 88 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 AL442163.3-201ENST00000554110 156 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 AC022884.2-201ENST00000578535 580 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
ACTN4O43707 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.21□□□□□ -1.42
ACTN4O43707 AL499605.1-201ENST00000604628 403 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 AL590240.4-201ENST00000616908 390 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 AC241377.1-201ENST00000619797 406 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ACTN4O43707 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
ACTN4O43707 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
ACTN4O43707 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ACTN4O43707 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ACTN4O43707 BX322639.1-202ENST00000423987 2213 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 LINC01963-201ENST00000562038 3148 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 AP001029.2-203ENST00000589795 4910 ntBASIC6.21□□□□□ -1.42
ACTN4O43707 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
ACTN4O43707 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.2□□□□□ -1.42
ACTN4O43707 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.2□□□□□ -1.42
ACTN4O43707 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
ACTN4O43707 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms