Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 MTCO1P53-201ENST00000441633 699 ntBASIC3.02□□□□□ -1.93
MSH4O15457 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.02□□□□□ -1.93
MSH4O15457 OFD1P3Y-201ENST00000453312 783 ntBASIC3.02□□□□□ -1.93
MSH4O15457 MTATP6P14-201ENST00000455189 673 ntBASIC3.02□□□□□ -1.93
MSH4O15457 RPL23AP31-201ENST00000456160 467 ntBASIC3.02□□□□□ -1.93
MSH4O15457 AC026410.2-201ENST00000460281 156 ntBASIC3.02□□□□□ -1.93
MSH4O15457 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.02□□□□□ -1.93
MSH4O15457 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.02□□□□□ -1.93
MSH4O15457 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.02□□□□□ -1.93
MSH4O15457 RNU1-61P-201ENST00000516107 151 ntBASIC3.02□□□□□ -1.93
MSH4O15457 RNU6-1095P-201ENST00000516148 108 ntBASIC3.02□□□□□ -1.93
MSH4O15457 RN7SKP31-201ENST00000516354 278 ntBASIC3.02□□□□□ -1.93
MSH4O15457 RPL12P22-201ENST00000519073 490 ntBASIC3.02□□□□□ -1.93
MSH4O15457 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.02□□□□□ -1.93
MSH4O15457 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.02□□□□□ -1.93
MSH4O15457 OR4H12P-201ENST00000556269 907 ntBASIC3.02□□□□□ -1.93
MSH4O15457 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.02□□□□□ -1.93
MSH4O15457 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.02□□□□□ -1.93
MSH4O15457 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.02□□□□□ -1.93
MSH4O15457 MAGOH2P-202ENST00000584384 429 ntBASIC3.02□□□□□ -1.93
MSH4O15457 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.02□□□□□ -1.93
MSH4O15457 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.02□□□□□ -1.93
MSH4O15457 AC097504.2-201ENST00000608088 454 ntBASIC3.02□□□□□ -1.93
MSH4O15457 AL355810.1-201ENST00000614629 552 ntBASIC3.02□□□□□ -1.93
MSH4O15457 MIR1322-201ENST00000638013 71 ntBASIC3.02□□□□□ -1.93
MSH4O15457 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.02□□□□□ -1.93
MSH4O15457 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
MSH4O15457 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.02□□□□□ -1.93
MSH4O15457 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
MSH4O15457 ASNSP3-201ENST00000451989 1306 ntBASIC3.01□□□□□ -1.93
MSH4O15457 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MSH4O15457 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
MSH4O15457 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MSH4O15457 RNU6-859P-201ENST00000362728 107 ntBASIC3.01□□□□□ -1.93
MSH4O15457 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
MSH4O15457 Y_RNA.500-201ENST00000384466 111 ntBASIC3.01□□□□□ -1.93
MSH4O15457 SNORD116-12-201ENST00000384468 92 ntBASIC3.01□□□□□ -1.93
MSH4O15457 MIR34A-201ENST00000385130 110 ntBASIC3.01□□□□□ -1.93
MSH4O15457 AL512633.1-201ENST00000399931 655 ntBASIC3.01□□□□□ -1.93
MSH4O15457 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.01□□□□□ -1.93
MSH4O15457 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.01□□□□□ -1.93
MSH4O15457 TRIAP1P1-201ENST00000427062 225 ntBASIC3.01□□□□□ -1.93
MSH4O15457 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.01□□□□□ -1.93
MSH4O15457 AL358794.1-201ENST00000445689 381 ntBASIC3.01□□□□□ -1.93
MSH4O15457 SSXP4-201ENST00000451349 245 ntBASIC3.01□□□□□ -1.93
MSH4O15457 PTGES3P5-201ENST00000455109 434 ntBASIC3.01□□□□□ -1.93
MSH4O15457 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.01□□□□□ -1.93
MSH4O15457 FCF1P6-201ENST00000456841 595 ntBASIC3.01□□□□□ -1.93
MSH4O15457 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.01□□□□□ -1.93
MSH4O15457 AC103975.1-201ENST00000482506 483 ntBASIC3.01□□□□□ -1.93
MSH4O15457 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.01□□□□□ -1.93
MSH4O15457 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.01□□□□□ -1.93
MSH4O15457 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.01□□□□□ -1.93
MSH4O15457 FAM60BP-201ENST00000578364 658 ntBASIC3.01□□□□□ -1.93
MSH4O15457 MIR3908-201ENST00000579798 126 ntBASIC3.01□□□□□ -1.93
MSH4O15457 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.01□□□□□ -1.93
MSH4O15457 AC104763.3-201ENST00000613765 618 ntBASIC3.01□□□□□ -1.93
MSH4O15457 AL353748.2-201ENST00000622148 471 ntBASIC3.01□□□□□ -1.93
MSH4O15457 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
MSH4O15457 AP003485.2-201ENST00000623636 610 ntBASIC3.01□□□□□ -1.93
MSH4O15457 CR381653.2-201ENST00000624041 768 ntBASIC3.01□□□□□ -1.93
MSH4O15457 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.01□□□□□ -1.93
MSH4O15457 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
MSH4O15457 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
MSH4O15457 SGO1P2-201ENST00000429458 1589 ntBASIC3□□□□□ -1.93
MSH4O15457 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3□□□□□ -1.93
MSH4O15457 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
MSH4O15457 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
MSH4O15457 Y_RNA.472-201ENST00000384322 102 ntBASIC3□□□□□ -1.93
MSH4O15457 RNU4-65P-201ENST00000410473 140 ntBASIC3□□□□□ -1.93
MSH4O15457 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3□□□□□ -1.93
MSH4O15457 AC019178.2-201ENST00000423595 505 ntBASIC3□□□□□ -1.93
MSH4O15457 HMGN2P20-201ENST00000437531 273 ntBASIC3□□□□□ -1.93
MSH4O15457 AC005297.2-201ENST00000450430 606 ntBASIC3□□□□□ -1.93
MSH4O15457 Z82190.1-201ENST00000454534 490 ntBASIC3□□□□□ -1.93
MSH4O15457 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3□□□□□ -1.93
MSH4O15457 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3□□□□□ -1.93
MSH4O15457 RPS27AP1-201ENST00000475545 471 ntBASIC3□□□□□ -1.93
MSH4O15457 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3□□□□□ -1.93
MSH4O15457 AC113420.1-201ENST00000507903 571 ntBASIC3□□□□□ -1.93
MSH4O15457 AC105914.1-201ENST00000511798 226 ntBASIC3□□□□□ -1.93
MSH4O15457 SNORA31.8-201ENST00000516327 108 ntBASIC3□□□□□ -1.93
MSH4O15457 SLC2A13P1-201ENST00000531560 322 ntBASIC3□□□□□ -1.93
MSH4O15457 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3□□□□□ -1.93
MSH4O15457 HIGD1AP17-201ENST00000554576 276 ntBASIC3□□□□□ -1.93
MSH4O15457 OR4T1P-201ENST00000554933 911 ntBASIC3□□□□□ -1.93
MSH4O15457 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3□□□□□ -1.93
MSH4O15457 MIR4474-201ENST00000579189 78 ntBASIC3□□□□□ -1.93
MSH4O15457 MIR4637-201ENST00000582405 84 ntBASIC3□□□□□ -1.93
MSH4O15457 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3□□□□□ -1.93
MSH4O15457 AC006023.1-201ENST00000603944 259 ntBASIC3□□□□□ -1.93
MSH4O15457 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3□□□□□ -1.93
MSH4O15457 AL121652.1-201ENST00000608851 448 ntBASIC3□□□□□ -1.93
MSH4O15457 AL390240.1-201ENST00000612950 384 ntBASIC3□□□□□ -1.93
MSH4O15457 AC009269.6-201ENST00000621778 588 ntBASIC3□□□□□ -1.93
MSH4O15457 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3□□□□□ -1.93
MSH4O15457 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3□□□□□ -1.93
MSH4O15457 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
MSH4O15457 AP002907.1-201ENST00000606361 1430 ntBASIC3□□□□□ -1.93
MSH4O15457 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms