Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.27□□□□□ -1.73
NPHP1O15259 AL450472.3-201ENST00000615578 367 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 AC021755.4-201ENST00000616620 456 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 AL607023.1-201ENST00000620045 248 ntBASIC4.27□□□□□ -1.73
NPHP1O15259 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.27□□□□□ -1.73
NPHP1O15259 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
NPHP1O15259 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPHP1O15259 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NPHP1O15259 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPHP1O15259 AL357075.1-201ENST00000404107 726 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 RN7SKP266-201ENST00000410232 287 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.26□□□□□ -1.73
NPHP1O15259 AL022400.1-201ENST00000423946 935 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 AL035407.1-201ENST00000429211 571 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 THAP5P1-201ENST00000439089 262 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.26□□□□□ -1.73
NPHP1O15259 RPL26P6-201ENST00000440913 438 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.26□□□□□ -1.73
NPHP1O15259 AL109741.2-201ENST00000455561 343 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 RPS27AP1-201ENST00000475545 471 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 SNORA70.16-201ENST00000516390 95 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.26□□□□□ -1.73
NPHP1O15259 EIF4BP1-201ENST00000554881 351 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.26□□□□□ -1.73
NPHP1O15259 AP005205.1-201ENST00000563503 508 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 MIR5004-201ENST00000579078 107 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 AL034351.1-201ENST00000605288 668 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 AL158211.4-201ENST00000606988 584 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 AC007490.1-201ENST00000624321 703 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 AC244205.2-202ENST00000635781 342 ntBASIC4.26□□□□□ -1.73
NPHP1O15259 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPHP1O15259 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NPHP1O15259 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPHP1O15259 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NPHP1O15259 AL391994.1-201ENST00000254724 282 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 RPL21P132-201ENST00000331267 462 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 MIR422A-201ENST00000362286 90 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 RNA5SP197-201ENST00000363357 119 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 RNU6-7-201ENST00000364784 107 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 RNU6-8-201ENST00000365467 107 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 RNU6-723P-201ENST00000383973 107 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 MIR320C1-201ENST00000408566 88 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 HMGN1P24-201ENST00000412282 298 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 RPL30P2-201ENST00000414021 291 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.25□□□□□ -1.73
NPHP1O15259 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.25□□□□□ -1.73
NPHP1O15259 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.25□□□□□ -1.73
NPHP1O15259 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.25□□□□□ -1.73
NPHP1O15259 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.25□□□□□ -1.73
NPHP1O15259 RSU1P2-202ENST00000437884 485 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 Z75741.1-201ENST00000446793 314 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.25□□□□□ -1.73
NPHP1O15259 ARPC3P2-201ENST00000457786 533 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 AP001025.2-201ENST00000490908 477 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 VN1R104P-201ENST00000505115 1009 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 AC109464.2-201ENST00000510242 943 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.25□□□□□ -1.73
NPHP1O15259 AC034159.1-201ENST00000513885 583 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.25□□□□□ -1.73
NPHP1O15259 HIGD1AP10-201ENST00000527837 282 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.25□□□□□ -1.73
NPHP1O15259 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.25□□□□□ -1.73
NPHP1O15259 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.25□□□□□ -1.73
NPHP1O15259 OR7K1P-201ENST00000546439 926 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 AC034268.2-201ENST00000571784 482 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 MTATP6P24-201ENST00000576835 677 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 MIR4999-201ENST00000585029 91 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 PLCE1P1-201ENST00000622094 305 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 AL356596.1-201ENST00000624230 379 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
NPHP1O15259 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPHP1O15259 MTCO1P9-201ENST00000505577 1534 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 AP000526.1-201ENST00000603308 1388 ntBASIC4.25□□□□□ -1.73
NPHP1O15259 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPHP1O15259 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NPHP1O15259 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
NPHP1O15259 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NPHP1O15259 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NPHP1O15259 RNU6-1200P-201ENST00000384162 107 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NPHP1O15259 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 RN7SKP111-201ENST00000410349 271 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 AC063979.1-201ENST00000415539 377 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.24□□□□□ -1.73
NPHP1O15259 ARF4P2-201ENST00000430209 526 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.24□□□□□ -1.73
NPHP1O15259 OR4K11P-201ENST00000431829 904 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 AC090774.1-201ENST00000435925 246 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 LSM1P1-201ENST00000438629 273 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.24□□□□□ -1.73
NPHP1O15259 FAM60DP-201ENST00000524174 632 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.24□□□□□ -1.73
NPHP1O15259 AC022080.3-201ENST00000544433 482 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 AL121576.1-201ENST00000556055 276 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.24□□□□□ -1.73
NPHP1O15259 AC006504.3-201ENST00000586818 523 ntBASIC4.24□□□□□ -1.73
NPHP1O15259 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.24□□□□□ -1.73
NPHP1O15259 AL109653.1-201ENST00000603091 248 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms