Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2A1O14983 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ATP2A1O14983 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ATP2A1O14983 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
ATP2A1O14983 AL513302.2-201ENST00000562313 1842 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AC017071.1-201ENST00000564407 2204 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A1O14983 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A1O14983 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A1O14983 RNU6-28P-201ENST00000362378 107 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2A1O14983 MIR634-201ENST00000385208 97 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2A1O14983 RN7SKP266-201ENST00000410232 287 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 RNU6-920P-201ENST00000410926 92 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 RNU4-78P-201ENST00000410940 126 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2A1O14983 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2A1O14983 AIMP1P1-201ENST00000418670 937 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.79□□□□□ -1.8
ATP2A1O14983 SDCBPP1-201ENST00000440192 890 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AC010468.1-201ENST00000461022 817 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 RPL23AP67-201ENST00000465341 474 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AC104563.1-201ENST00000476147 376 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 NIPA2P2-201ENST00000496376 1083 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2A1O14983 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2A1O14983 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2A1O14983 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.79□□□□□ -1.8
ATP2A1O14983 SCARNA13-201ENST00000516672 275 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AL356057.1-201ENST00000533798 831 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.79□□□□□ -1.8
ATP2A1O14983 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.79□□□□□ -1.8
ATP2A1O14983 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.79□□□□□ -1.8
ATP2A1O14983 AC012435.1-202ENST00000568772 240 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 MIR3915-201ENST00000578518 97 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 MIR4425-201ENST00000580572 84 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AC090616.5-202ENST00000582111 297 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AP001004.1-201ENST00000582468 324 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.79□□□□□ -1.8
ATP2A1O14983 AL353997.4-201ENST00000586196 166 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.79□□□□□ -1.8
ATP2A1O14983 AL592295.2-201ENST00000612578 206 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 MIR7844-201ENST00000616161 122 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 SNORD39.4-201ENST00000620099 78 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AC110801.1-201ENST00000623590 212 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AC026422.1-201ENST00000623961 452 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AC009039.2-201ENST00000624524 529 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 AC048347.1-201ENST00000624621 427 ntBASIC3.79□□□□□ -1.8
ATP2A1O14983 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A1O14983 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A1O14983 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A1O14983 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A1O14983 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ATP2A1O14983 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.79□□□□□ -1.8
ATP2A1O14983 RNU6-289P-201ENST00000364093 107 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 RNU6-660P-201ENST00000364566 109 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 MIR320C1-201ENST00000408566 88 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.78□□□□□ -1.8
ATP2A1O14983 Z99497.1-201ENST00000421282 135 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 AL353678.1-201ENST00000422735 741 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.78□□□□□ -1.8
ATP2A1O14983 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2A1O14983 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.78□□□□□ -1.8
ATP2A1O14983 ISCA1P2-201ENST00000438679 421 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 UBE2D3P4-201ENST00000441973 436 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 AL671855.1-201ENST00000446875 1203 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 HMGB1P15-201ENST00000453854 435 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 HMGB1P25-201ENST00000468402 607 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 SETP11-201ENST00000473027 690 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
ATP2A1O14983 TXNP6-201ENST00000510190 310 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 OR5BM1P-201ENST00000512021 366 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 MTND5P4-201ENST00000514978 288 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 RN7SKP60-201ENST00000516985 239 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.78□□□□□ -1.8
ATP2A1O14983 AP000889.1-201ENST00000530968 660 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2A1O14983 AC004024.1-201ENST00000549244 247 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.78□□□□□ -1.8
ATP2A1O14983 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.78□□□□□ -1.8
ATP2A1O14983 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.78□□□□□ -1.8
ATP2A1O14983 AC011260.1-201ENST00000578420 472 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 WISP1-OT1-201ENST00000602893 642 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 MTCYBP22-201ENST00000603788 447 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2A1O14983 AC106028.5-201ENST00000610332 395 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 AC135507.2-201ENST00000612443 309 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 AL596245.1-201ENST00000618994 362 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 AC048344.4-201ENST00000619744 527 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.78□□□□□ -1.8
ATP2A1O14983 AC091931.1-201ENST00000623488 728 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 AC007494.3-201ENST00000624660 743 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.78□□□□□ -1.8
ATP2A1O14983 AC006927.3-201ENST00000638789 384 ntBASIC3.78□□□□□ -1.8
ATP2A1O14983 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.78□□□□□ -1.8
ATP2A1O14983 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
ATP2A1O14983 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.78□□□□□ -1.8
ATP2A1O14983 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
ATP2A1O14983 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms