Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RPL21P103-201ENST00000479921 488 ntBASIC3.87□□□□□ -1.79
CUX2O14529 MTCYBP20-201ENST00000524239 1129 ntBASIC3.87□□□□□ -1.79
CUX2O14529 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.87□□□□□ -1.79
CUX2O14529 AL136520.1-202ENST00000555494 763 ntBASIC3.87□□□□□ -1.79
CUX2O14529 AC084824.5-201ENST00000612009 413 ntBASIC3.87□□□□□ -1.79
CUX2O14529 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CUX2O14529 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CUX2O14529 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CUX2O14529 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CUX2O14529 RNU6-481P-201ENST00000384194 107 ntBASIC3.86□□□□□ -1.79
CUX2O14529 BTBD10P2-201ENST00000404779 676 ntBASIC3.86□□□□□ -1.79
CUX2O14529 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.86□□□□□ -1.79
CUX2O14529 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CUX2O14529 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.86□□□□□ -1.79
CUX2O14529 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.86□□□□□ -1.79
CUX2O14529 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.86□□□□□ -1.79
CUX2O14529 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.86□□□□□ -1.79
CUX2O14529 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.86□□□□□ -1.79
CUX2O14529 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.86□□□□□ -1.79
CUX2O14529 AC091488.1-201ENST00000604239 660 ntBASIC3.86□□□□□ -1.79
CUX2O14529 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.86□□□□□ -1.79
CUX2O14529 AC026741.1-201ENST00000605892 482 ntBASIC3.86□□□□□ -1.79
CUX2O14529 AC113194.1-201ENST00000606037 500 ntBASIC3.86□□□□□ -1.79
CUX2O14529 AC018926.3-201ENST00000618841 406 ntBASIC3.86□□□□□ -1.79
CUX2O14529 AL161431.1-201ENST00000618966 4205 ntBASIC3.86□□□□□ -1.79
CUX2O14529 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CUX2O14529 RNU6-707P-201ENST00000364647 95 ntBASIC3.86□□□□□ -1.79
CUX2O14529 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CUX2O14529 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.86□□□□□ -1.79
CUX2O14529 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CUX2O14529 AP002784.2-201ENST00000397300 549 ntBASIC3.86□□□□□ -1.79
CUX2O14529 PRRC2CP1-201ENST00000404428 159 ntBASIC3.86□□□□□ -1.79
CUX2O14529 AL606495.1-201ENST00000422100 813 ntBASIC3.86□□□□□ -1.79
CUX2O14529 PTP4A1P7-201ENST00000423476 514 ntBASIC3.86□□□□□ -1.79
CUX2O14529 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.86□□□□□ -1.79
CUX2O14529 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.86□□□□□ -1.79
CUX2O14529 AP000926.1-201ENST00000479573 241 ntBASIC3.86□□□□□ -1.79
CUX2O14529 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.86□□□□□ -1.79
CUX2O14529 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.86□□□□□ -1.79
CUX2O14529 RN7SKP40-201ENST00000517211 242 ntBASIC3.86□□□□□ -1.79
CUX2O14529 HMGB1P1-201ENST00000522557 636 ntBASIC3.86□□□□□ -1.79
CUX2O14529 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.86□□□□□ -1.79
CUX2O14529 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.86□□□□□ -1.79
CUX2O14529 AL512506.1-201ENST00000613918 449 ntBASIC3.86□□□□□ -1.79
CUX2O14529 MIR4496-201ENST00000635896 61 ntBASIC3.86□□□□□ -1.79
CUX2O14529 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CUX2O14529 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CUX2O14529 MTCO1P4-201ENST00000520516 1409 ntBASIC3.85□□□□□ -1.79
CUX2O14529 DCAF13P1-201ENST00000495256 1330 ntBASIC3.85□□□□□ -1.79
CUX2O14529 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CUX2O14529 AC016716.1-201ENST00000265882 708 ntBASIC3.85□□□□□ -1.79
CUX2O14529 RNU6-609P-201ENST00000365459 107 ntBASIC3.85□□□□□ -1.79
CUX2O14529 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.85□□□□□ -1.79
CUX2O14529 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.85□□□□□ -1.79
CUX2O14529 AC092427.1-202ENST00000430569 476 ntBASIC3.85□□□□□ -1.79
CUX2O14529 TVP23BP2-201ENST00000455082 615 ntBASIC3.85□□□□□ -1.79
CUX2O14529 SNORD13-201ENST00000459299 104 ntBASIC3.85□□□□□ -1.79
CUX2O14529 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.85□□□□□ -1.79
CUX2O14529 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.85□□□□□ -1.79
CUX2O14529 AC005296.1-201ENST00000616145 209 ntBASIC3.85□□□□□ -1.79
CUX2O14529 AL109659.3-201ENST00000624985 950 ntBASIC3.85□□□□□ -1.79
CUX2O14529 AC121333.1-201ENST00000567488 2709 ntBASIC3.84□□□□□ -1.8
CUX2O14529 RNU4-62P-201ENST00000410125 130 ntBASIC3.84□□□□□ -1.8
CUX2O14529 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.84□□□□□ -1.8
CUX2O14529 FABP5P3-201ENST00000437960 408 ntBASIC3.84□□□□□ -1.8
CUX2O14529 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.84□□□□□ -1.8
CUX2O14529 snoU13.7-201ENST00000459220 104 ntBASIC3.84□□□□□ -1.8
CUX2O14529 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.84□□□□□ -1.8
CUX2O14529 AL121594.1-201ENST00000475906 575 ntBASIC3.84□□□□□ -1.8
CUX2O14529 AC121161.1-201ENST00000510606 652 ntBASIC3.84□□□□□ -1.8
CUX2O14529 RNA5SP385-201ENST00000515947 110 ntBASIC3.84□□□□□ -1.8
CUX2O14529 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CUX2O14529 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.84□□□□□ -1.8
CUX2O14529 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CUX2O14529 CENPUP2-201ENST00000555897 1186 ntBASIC3.84□□□□□ -1.8
CUX2O14529 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.84□□□□□ -1.8
CUX2O14529 AL354943.1-201ENST00000572103 781 ntBASIC3.84□□□□□ -1.8
CUX2O14529 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
CUX2O14529 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.84□□□□□ -1.8
CUX2O14529 AC098483.2-201ENST00000603158 454 ntBASIC3.84□□□□□ -1.8
CUX2O14529 APOOP1-201ENST00000604695 592 ntBASIC3.84□□□□□ -1.8
CUX2O14529 BX664608.1-201ENST00000610519 487 ntBASIC3.84□□□□□ -1.8
CUX2O14529 AC105429.2-201ENST00000610567 517 ntBASIC3.84□□□□□ -1.8
CUX2O14529 FAM157B-203ENST00000639350 358 ntBASIC3.84□□□□□ -1.8
CUX2O14529 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CUX2O14529 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CUX2O14529 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CUX2O14529 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.83□□□□□ -1.8
CUX2O14529 SNORA25.6-201ENST00000364121 118 ntBASIC3.83□□□□□ -1.8
CUX2O14529 SNORA41-201ENST00000384675 132 ntBASIC3.83□□□□□ -1.8
CUX2O14529 RPS15AP40-201ENST00000419621 391 ntBASIC3.83□□□□□ -1.8
CUX2O14529 AC246680.2-201ENST00000422106 389 ntBASIC3.83□□□□□ -1.8
CUX2O14529 DEFB130D-201ENST00000426866 237 ntBASIC3.83□□□□□ -1.8
CUX2O14529 AC233279.1-201ENST00000455300 423 ntBASIC3.83□□□□□ -1.8
CUX2O14529 AL049830.2-201ENST00000480072 201 ntBASIC3.83□□□□□ -1.8
CUX2O14529 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.83□□□□□ -1.8
CUX2O14529 AC008885.2-201ENST00000509506 930 ntBASIC3.83□□□□□ -1.8
CUX2O14529 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.83□□□□□ -1.8
CUX2O14529 AC124293.1-201ENST00000530034 493 ntBASIC3.83□□□□□ -1.8
CUX2O14529 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms