Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RN7SKP159-201ENST00000410657 292 ntBASIC5.29□□□□□ -1.56
SOX1O00570 RPL31P2-201ENST00000413849 377 ntBASIC5.29□□□□□ -1.56
SOX1O00570 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.29□□□□□ -1.56
SOX1O00570 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.29□□□□□ -1.56
SOX1O00570 AC073410.1-201ENST00000435125 589 ntBASIC5.29□□□□□ -1.56
SOX1O00570 RN7SL443P-201ENST00000464331 290 ntBASIC5.29□□□□□ -1.56
SOX1O00570 AC073073.1-201ENST00000493920 463 ntBASIC5.29□□□□□ -1.56
SOX1O00570 RPS17P5-201ENST00000498293 408 ntBASIC5.29□□□□□ -1.56
SOX1O00570 RBBP4P6-201ENST00000508098 202 ntBASIC5.29□□□□□ -1.56
SOX1O00570 AC091912.1-201ENST00000511351 248 ntBASIC5.29□□□□□ -1.56
SOX1O00570 AC104136.1-201ENST00000512969 394 ntBASIC5.29□□□□□ -1.56
SOX1O00570 Y_RNA.670-201ENST00000516255 105 ntBASIC5.29□□□□□ -1.56
SOX1O00570 RNU6-1069P-201ENST00000516612 133 ntBASIC5.29□□□□□ -1.56
SOX1O00570 SNORD116.3-201ENST00000517176 78 ntBASIC5.29□□□□□ -1.56
SOX1O00570 AC100870.1-201ENST00000522035 505 ntBASIC5.29□□□□□ -1.56
SOX1O00570 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SOX1O00570 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.29□□□□□ -1.56
SOX1O00570 AL138889.2-201ENST00000603883 242 ntBASIC5.29□□□□□ -1.56
SOX1O00570 AC009570.1-201ENST00000609599 745 ntBASIC5.29□□□□□ -1.56
SOX1O00570 AC244107.2-201ENST00000611773 76 ntBASIC5.29□□□□□ -1.56
SOX1O00570 AC091925.2-201ENST00000625059 256 ntBASIC5.29□□□□□ -1.56
SOX1O00570 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SOX1O00570 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SOX1O00570 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.29□□□□□ -1.56
SOX1O00570 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SOX1O00570 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
SOX1O00570 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SOX1O00570 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SOX1O00570 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SOX1O00570 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 AL031119.1-201ENST00000404707 1879 ntBASIC5.28□□□□□ -1.56
SOX1O00570 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
SOX1O00570 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 RNU6-1109P-201ENST00000391187 107 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AL109755.1-201ENST00000401791 649 ntBASIC5.28□□□□□ -1.56
SOX1O00570 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX1O00570 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX1O00570 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX1O00570 AC236972.1-201ENST00000433225 199 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX1O00570 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX1O00570 RPS20P21-201ENST00000466859 343 ntBASIC5.28□□□□□ -1.56
SOX1O00570 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX1O00570 RN7SL432P-201ENST00000484057 298 ntBASIC5.28□□□□□ -1.56
SOX1O00570 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX1O00570 SNORA14.1-201ENST00000516113 141 ntBASIC5.28□□□□□ -1.56
SOX1O00570 RNU6-388P-201ENST00000517012 105 ntBASIC5.28□□□□□ -1.56
SOX1O00570 RNU6-389P-201ENST00000517048 105 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX1O00570 DEFB108D-201ENST00000527787 222 ntBASIC5.28□□□□□ -1.56
SOX1O00570 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.28□□□□□ -1.56
SOX1O00570 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.28□□□□□ -1.56
SOX1O00570 AC026470.2-201ENST00000561492 181 ntBASIC5.28□□□□□ -1.56
SOX1O00570 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 AL670379.6-201ENST00000603753 252 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AC008162.1-201ENST00000604718 254 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AL670379.1-201ENST00000604752 252 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AL451044.1-201ENST00000604867 238 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AL670379.5-201ENST00000605253 252 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AL160281.1-201ENST00000605307 311 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AL670379.8-201ENST00000605353 252 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AL670379.7-201ENST00000605823 252 ntBASIC5.28□□□□□ -1.56
SOX1O00570 AC062037.2-201ENST00000610137 73 ntBASIC5.28□□□□□ -1.56
SOX1O00570 FAM27B-201ENST00000610601 213 ntBASIC5.28□□□□□ -1.56
SOX1O00570 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX1O00570 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.28□□□□□ -1.56
SOX1O00570 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SOX1O00570 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.28□□□□□ -1.56
SOX1O00570 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX1O00570 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
SOX1O00570 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX1O00570 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SOX1O00570 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
SOX1O00570 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SOX1O00570 SNORD51-201ENST00000384320 80 ntBASIC5.27□□□□□ -1.57
SOX1O00570 Y_RNA.489-201ENST00000384410 101 ntBASIC5.27□□□□□ -1.57
SOX1O00570 Y_RNA.493-201ENST00000384422 102 ntBASIC5.27□□□□□ -1.57
SOX1O00570 PPIAP31-201ENST00000405422 495 ntBASIC5.27□□□□□ -1.57
SOX1O00570 SNORA77-201ENST00000408716 125 ntBASIC5.27□□□□□ -1.57
SOX1O00570 RNU2-47P-201ENST00000410649 186 ntBASIC5.27□□□□□ -1.57
SOX1O00570 CYCSP19-201ENST00000411715 316 ntBASIC5.27□□□□□ -1.57
SOX1O00570 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX1O00570 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX1O00570 AC093106.2-201ENST00000428212 385 ntBASIC5.27□□□□□ -1.57
SOX1O00570 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.27□□□□□ -1.57
SOX1O00570 HIGD1AP11-201ENST00000438361 280 ntBASIC5.27□□□□□ -1.57
SOX1O00570 RPS24P13-201ENST00000442520 397 ntBASIC5.27□□□□□ -1.57
SOX1O00570 HSFY6P-201ENST00000445573 403 ntBASIC5.27□□□□□ -1.57
SOX1O00570 RNU7-167P-201ENST00000459160 62 ntBASIC5.27□□□□□ -1.57
SOX1O00570 PPP1R11P1-201ENST00000486095 376 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms