Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 RNA5SP181-201ENST00000410246 98 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AL137014.1-201ENST00000420490 1226 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 RAC1P7-201ENST00000445367 377 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 UBBP3-201ENST00000445497 241 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 Z96811.1-201ENST00000445880 108 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AL358832.1-201ENST00000497800 389 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 RPS27P27-201ENST00000498779 255 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 CAB39P1-201ENST00000502277 460 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC008427.1-201ENST00000503102 655 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 RNU6-1028P-201ENST00000517164 93 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 DEFB130C-202ENST00000530001 230 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 NBEAP1-201ENST00000554452 979 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC104072.1-201ENST00000568817 668 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 MIR5092-201ENST00000583139 88 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC008739.3-201ENST00000603262 127 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AP002826.1-201ENST00000608835 315 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AL731566.2-201ENST00000618971 317 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC010297.1-201ENST00000623948 149 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 AC079228.1-201ENST00000624774 1049 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 TAB3P1-202ENST00000452645 1634 ntBASIC2.42□□□□□ -2.02
TNFRSF11BO00300 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TNFRSF11BO00300 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 RNA5SP139-201ENST00000364340 117 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 SNORA18.3-201ENST00000384122 132 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 Y_RNA.578-201ENST00000390903 88 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 RNU6-882P-201ENST00000391025 103 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 RNU2-42P-201ENST00000410697 113 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 RNA5SP492-201ENST00000411330 114 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 USP9YP20-201ENST00000419224 558 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 USP9YP21-201ENST00000420603 432 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 PTP4A1P7-201ENST00000423476 514 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC011816.1-201ENST00000441346 546 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 RPL23AP20-201ENST00000447965 421 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC005297.2-201ENST00000450430 606 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC010099.1-201ENST00000455434 375 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 SNORA84-201ENST00000459229 133 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 KC877373.1-201ENST00000479066 408 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AP002812.1-201ENST00000495378 474 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 RPL21P131-201ENST00000497298 483 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 COX7A2P2-201ENST00000505291 250 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 SUMO2P5-201ENST00000506790 245 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC069306.1-201ENST00000507006 843 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC010374.2-201ENST00000512933 535 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 HMGB1P41-201ENST00000520234 440 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 OR5AK1P-201ENST00000524837 922 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AP003102.1-201ENST00000525638 661 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 SETP7-201ENST00000552169 453 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC090695.1-201ENST00000561269 1222 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AC020895.1-201ENST00000595362 272 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 U73023.1-201ENST00000603134 700 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 RPL23AP88-201ENST00000605759 454 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 SNHG22-203ENST00000617833 660 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 AP003476.1-201ENST00000623984 516 ntBASIC2.41□□□□□ -2.02
TNFRSF11BO00300 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
TNFRSF11BO00300 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
TNFRSF11BO00300 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
TNFRSF11BO00300 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.4□□□□□ -2.02
TNFRSF11BO00300 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TNFRSF11BO00300 SNRPEP3-201ENST00000338402 276 ntBASIC2.4□□□□□ -2.03
TNFRSF11BO00300 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TNFRSF11BO00300 MIR506-201ENST00000384998 124 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms