Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SRRM3A6NNA2 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 TEX21P-201ENST00000447107 1476 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 RNU6-301P-201ENST00000384277 107 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AL133384.1-201ENST00000412744 351 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 ARF4P2-201ENST00000430209 526 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC091862.1-201ENST00000438016 1100 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 RPS26P56-201ENST00000444468 240 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 RANP8-201ENST00000444720 713 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 RPL39P6-201ENST00000448289 150 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC093392.2-201ENST00000450682 337 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 MTCO3P2-201ENST00000457365 171 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 RPS4XP2-201ENST00000458402 793 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 RN7SL442P-201ENST00000473804 320 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC126182.1-201ENST00000478134 357 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 RPS4XP22-201ENST00000480755 780 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC020893.1-201ENST00000502452 580 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC108941.1-201ENST00000502853 530 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 OR4A45P-201ENST00000529954 901 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC008011.1-201ENST00000545989 227 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC010653.1-201ENST00000571108 881 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 MIR4637-201ENST00000582405 84 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 MIR548AB-201ENST00000584917 84 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC015871.2-201ENST00000603605 948 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC010200.2-201ENST00000605098 235 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AL589743.7-201ENST00000612637 233 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC123768.4-201ENST00000616244 701 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 U6.42-201ENST00000618440 107 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC095031.1-201ENST00000623685 672 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 SEPT14P19-203ENST00000633205 211 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC099654.13-201ENST00000639774 207 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
SRRM3A6NNA2 AC116096.1-201ENST00000566804 2314 ntBASIC3.81□□□□□ -1.8
SRRM3A6NNA2 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 RNU5F-6P-201ENST00000362979 116 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 RNU6-657P-201ENST00000383904 107 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 RNU6-348P-201ENST00000384386 107 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 SNRPEP2-201ENST00000397592 279 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 HMGB1P17-201ENST00000403495 628 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 SNORA3.3-201ENST00000408712 125 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AL031736.2-201ENST00000426573 787 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC097713.2-201ENST00000430199 356 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 DNAJC19P4-201ENST00000440115 345 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 RPS4XP4-201ENST00000443195 763 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC006480.1-201ENST00000449887 378 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 MEMO1P3-201ENST00000459811 302 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC092757.1-201ENST00000467293 467 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 RN7SL330P-201ENST00000469709 307 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC093809.1-201ENST00000509155 340 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 SNORD116-26-201ENST00000516006 96 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AP006245.1-201ENST00000522549 120 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AP002453.2-201ENST00000533503 320 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 EIF5A2P1-201ENST00000564027 460 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 MIR6868-201ENST00000611215 58 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 MIR6715A-201ENST00000615929 79 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 AL359757.2-201ENST00000624309 274 ntBASIC3.8□□□□□ -1.8
SRRM3A6NNA2 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SRRM3A6NNA2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms