Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AC146507.1-201ENST00000468335 354 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 MTCO2P32-201ENST00000514865 403 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 RNU1-61P-201ENST00000516107 151 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 RN7SKP234-201ENST00000517173 224 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 OR4U1P-201ENST00000554958 912 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AC103710.2-202ENST00000641454 2853 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AC110792.3-201ENST00000595906 1614 ntBASIC1.4□□□□□ -2.19
CPSF4LA6NMK7 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AC130650.2-201ENST00000618736 2403 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 BX276092.3-201ENST00000424182 230 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AC233728.2-201ENST00000425348 757 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AL445669.1-201ENST00000426743 755 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 RPL7P12-201ENST00000446719 750 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AC116337.1-201ENST00000509680 687 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 Y_RNA.675-201ENST00000516389 149 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 OR6C73P-201ENST00000546432 358 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 SETP7-201ENST00000552169 453 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 SNRPGP15-201ENST00000600149 222 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AC020658.4-201ENST00000613987 684 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AL031601.2-202ENST00000622650 282 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AC103798.2-201ENST00000624292 632 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AP000648.3-201ENST00000623539 4507 ntBASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.39□□□□□ -2.19
CPSF4LA6NMK7 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 AL591034.1-201ENST00000407447 340 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 AL513477.1-202ENST00000417061 214 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 RPL7P37-201ENST00000425095 738 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 OR4K11P-201ENST00000431829 904 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 RPS26P56-201ENST00000444468 240 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 RPL23AP23-201ENST00000452590 471 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 AMD1P1-201ENST00000457220 922 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 RPL23AP42-201ENST00000471152 471 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 RN7SKP31-201ENST00000516354 278 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 SNORA31.23-201ENST00000517219 133 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 AC026241.1-201ENST00000517873 2142 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 AC083923.1-201ENST00000523708 376 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 ATP5F1P5-201ENST00000526403 760 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 MTCYBP41-201ENST00000528913 1123 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 MIR4255-201ENST00000579351 72 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 AL161912.3-201ENST00000605404 628 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 AC007275.1-201ENST00000621243 671 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 ZNF734P-201ENST00000419494 1534 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 MTCO1P4-201ENST00000520516 1409 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 AC135776.4-201ENST00000624300 1904 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 MTND5P28-201ENST00000438005 1594 ntBASIC1.38□□□□□ -2.19
CPSF4LA6NMK7 AL390862.1-201ENST00000635467 1469 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AC091564.4-201ENST00000533934 2194 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 RNU6-799P-201ENST00000363567 107 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 DEFB109C-201ENST00000382575 264 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 DEFB109B-201ENST00000382656 264 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 MIR23A-201ENST00000385245 73 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 RPL7P27-201ENST00000403775 720 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 RPL26P37-201ENST00000411983 438 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AL356379.1-201ENST00000414105 126 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 VN1R31P-201ENST00000417498 730 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 CYCSP49-201ENST00000420810 319 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 PGBD4P6-201ENST00000421501 610 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AL513185.2-201ENST00000425543 193 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 MTATP6P4-201ENST00000427725 675 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AL121871.1-201ENST00000443413 436 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AP003385.6-201ENST00000531603 374 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 OSBPL9P3-201ENST00000534523 595 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AC018630.1-201ENST00000541376 925 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 UBE2L4-201ENST00000587688 464 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AC106028.5-201ENST00000610332 395 ntBASIC1.37□□□□□ -2.19
CPSF4LA6NMK7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms