Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
LINC01549A6NIU2 CDC27P3-201ENST00000635418 1910 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 NUP58P1-201ENST00000502546 1738 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 AC011477.1-204ENST00000623416 1325 ntBASIC1.15□□□□□ -2.23
LINC01549A6NIU2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.14□□□□□ -2.23
LINC01549A6NIU2 SNORA5B-201ENST00000363786 132 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 SNORA64-201ENST00000384674 134 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 AC096664.2-201ENST00000411843 406 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 AC092745.2-202ENST00000411880 369 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.14□□□□□ -2.23
LINC01549A6NIU2 DPH3P2-201ENST00000422618 250 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LINC01549A6NIU2 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 RPS7P2-201ENST00000435134 607 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 ARF4P4-201ENST00000439608 520 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 FABP5P13-201ENST00000452144 328 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 PMCHL2-203ENST00000457791 237 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 SNORD121B-201ENST00000458838 81 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 CABYRP1-201ENST00000465493 1045 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 AC055855.1-201ENST00000489563 579 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 RPL9P6-201ENST00000492764 598 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
LINC01549A6NIU2 SNORA70.24-201ENST00000517233 118 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.14□□□□□ -2.23
LINC01549A6NIU2 HSBP1P1-201ENST00000555205 166 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC01549A6NIU2 MIR3117-201ENST00000584034 78 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC1.14□□□□□ -2.23
LINC01549A6NIU2 AC126118.1-201ENST00000607744 628 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 AC068944.2-201ENST00000610373 403 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 AC005296.1-201ENST00000616145 209 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 AL731566.2-201ENST00000618971 317 ntBASIC1.14□□□□□ -2.23
LINC01549A6NIU2 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.14□□□□□ -2.23
LINC01549A6NIU2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC1.14□□□□□ -2.23
LINC01549A6NIU2 HSPA8P4-201ENST00000511877 1920 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LINC01549A6NIU2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
LINC01549A6NIU2 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LINC01549A6NIU2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
LINC01549A6NIU2 RNU6-525P-201ENST00000363685 104 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 Z98749.2-208ENST00000381646 500 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 RNU2-2P-201ENST00000410396 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 RPL23AP39-201ENST00000415533 405 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 Z85995.1-201ENST00000415547 335 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.13□□□□□ -2.23
LINC01549A6NIU2 Z80107.1-201ENST00000436830 412 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 OR6K5P-201ENST00000447050 945 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.13□□□□□ -2.23
LINC01549A6NIU2 FO393415.2-201ENST00000480085 343 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
LINC01549A6NIU2 RPL38P4-201ENST00000502376 214 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.13□□□□□ -2.23
LINC01549A6NIU2 AC016550.3-201ENST00000515706 767 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 RNU6-943P-201ENST00000516960 98 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.13□□□□□ -2.23
LINC01549A6NIU2 EEF1A1P37-201ENST00000522748 715 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 AC068313.1-201ENST00000604028 1008 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 MIR502-201ENST00000606349 86 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.15-201ENST00000611544 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.16-201ENST00000613119 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.12-201ENST00000613778 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.20-201ENST00000613956 192 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.9-201ENST00000615427 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.11-201ENST00000616345 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.2-201ENST00000616535 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.3-201ENST00000617785 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.19-201ENST00000618602 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 RNU2-1-201ENST00000618664 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.6-201ENST00000619225 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.5-201ENST00000619465 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 U2.10-201ENST00000620268 191 ntBASIC1.13□□□□□ -2.23
LINC01549A6NIU2 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.13□□□□□ -2.23
LINC01549A6NIU2 AL137003.2-201ENST00000606924 2538 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 ELF2P3-201ENST00000445099 1506 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 UBE2L2-201ENST00000254302 429 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 SNORA80A-201ENST00000363922 136 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AL031679.1-201ENST00000400616 525 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AL023284.1-201ENST00000403956 276 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 RNU6-1140P-201ENST00000410517 106 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 RN7SKP51-201ENST00000410781 304 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AL133384.1-201ENST00000412744 351 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 Z98742.2-201ENST00000431564 187 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 RPL7P54-201ENST00000438336 674 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 RPL30P14-201ENST00000482744 348 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AC140059.1-201ENST00000489238 361 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 RPL23AP63-201ENST00000498752 471 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 EIF4EP3-201ENST00000498782 656 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms