Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.7□□□□□ -2.14
CNOT1A5YKK6 7SK.7-201ENST00000603504 247 ntBASIC1.7□□□□□ -2.14
CNOT1A5YKK6 AL627230.5-201ENST00000619807 58 ntBASIC1.7□□□□□ -2.14
CNOT1A5YKK6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CNOT1A5YKK6 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CNOT1A5YKK6 AC005336.3-201ENST00000623833 2679 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 Y_RNA.433-201ENST00000384089 102 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 MTND4LP13-201ENST00000425022 298 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 AC005156.1-201ENST00000613371 573 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 RNA5SP167-201ENST00000365461 116 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 BTBD10P2-201ENST00000404779 676 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 HMGB1P13-201ENST00000406019 642 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 HIGD1AP11-201ENST00000438361 280 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 RNU6-826P-201ENST00000516827 104 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 AL627309.6-201ENST00000606857 840 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 AC105429.2-201ENST00000610567 517 ntBASIC1.69□□□□□ -2.14
CNOT1A5YKK6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.69□□□□□ -2.14
CNOT1A5YKK6 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
CNOT1A5YKK6 ZNF876P-202ENST00000398732 1485 ntBASIC1.68□□□□□ -2.14
CNOT1A5YKK6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
CNOT1A5YKK6 SET-203ENST00000372688 801 ntTSL 2 BASIC1.68□□□□□ -2.14
CNOT1A5YKK6 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CNOT1A5YKK6 SNORA70.7-201ENST00000384159 133 ntBASIC1.68□□□□□ -2.14
CNOT1A5YKK6 AL136133.1-201ENST00000413694 376 ntBASIC1.68□□□□□ -2.14
CNOT1A5YKK6 AC108734.3-201ENST00000481241 1165 ntBASIC1.68□□□□□ -2.14
CNOT1A5YKK6 SNORA31.15-201ENST00000516771 132 ntBASIC1.68□□□□□ -2.14
CNOT1A5YKK6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.68□□□□□ -2.14
CNOT1A5YKK6 AC016957.1-201ENST00000534895 309 ntBASIC1.68□□□□□ -2.14
CNOT1A5YKK6 AC104581.2-201ENST00000572227 430 ntBASIC1.68□□□□□ -2.14
CNOT1A5YKK6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.68□□□□□ -2.14
CNOT1A5YKK6 FAM106DP-201ENST00000586416 501 ntBASIC1.68□□□□□ -2.14
CNOT1A5YKK6 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.68□□□□□ -2.14
CNOT1A5YKK6 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.68□□□□□ -2.14
CNOT1A5YKK6 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.68□□□□□ -2.14
CNOT1A5YKK6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.68□□□□□ -2.14
CNOT1A5YKK6 BX649567.1-201ENST00000642071 1134 ntBASIC1.68□□□□□ -2.14
CNOT1A5YKK6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CNOT1A5YKK6 TAS2R15P-201ENST00000390674 928 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 TOMM22P1-201ENST00000418578 312 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AC244505.5-201ENST00000443639 207 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 CD69-203ENST00000536709 1020 ntTSL 2 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 ZNF192P1-203ENST00000565888 810 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AL157834.3-201ENST00000615543 103 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 RNU4-41P-201ENST00000364426 143 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 RNU6-1105P-201ENST00000384774 107 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AL096701.2-201ENST00000416920 238 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 HSPE1P22-201ENST00000456856 327 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AMD1P1-201ENST00000457220 922 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AC022634.1-201ENST00000520765 532 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 PTP4A1P6-201ENST00000531034 478 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 MIR4506-201ENST00000584693 77 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AC004943.3-201ENST00000624116 600 ntBASIC1.67□□□□□ -2.14
CNOT1A5YKK6 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.67□□□□□ -2.14
CNOT1A5YKK6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 ELOCP10-201ENST00000440624 327 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 PTGES3P5-201ENST00000455109 434 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AC079804.2-201ENST00000490376 200 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AF131216.2-201ENST00000512316 564 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 RN7SKP34-201ENST00000516142 244 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 ELOCP34-201ENST00000604436 327 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AC006023.2-201ENST00000609916 167 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CNOT1A5YKK6 RNA5SP457-201ENST00000363657 124 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 RNA5SP344-201ENST00000411081 104 ntBASIC1.66□□□□□ -2.14
CNOT1A5YKK6 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms