Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 DHFRP6-201ENST00000401776 268 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AL031121.1-201ENST00000406553 254 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6-712P-201ENST00000410558 100 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 ELOCP9-201ENST00000418624 239 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 MTCO2P20-201ENST00000437339 673 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 HMGN2P20-201ENST00000437531 273 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 MTND2P20-201ENST00000440805 661 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AL606517.1-201ENST00000446914 387 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 HMGB3P8-201ENST00000449709 577 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 USP9YP25-201ENST00000457708 443 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC087276.1-201ENST00000529659 480 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC087481.2-201ENST00000565492 330 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC006254.3-201ENST00000603353 884 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC131235.4-201ENST00000609288 620 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC006963.1-201ENST00000624003 1052 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AC091925.2-201ENST00000625059 256 ntBASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SMIM28A0A1B0GU29 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AC099786.3-201ENST00000565735 1410 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6-560P-201ENST00000364007 108 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6-636P-201ENST00000384598 107 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AC079780.1-201ENST00000428259 207 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 NEK4P1-201ENST00000433383 879 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AL590103.1-201ENST00000434488 307 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AC112220.1-201ENST00000434628 355 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 RPS24P6-201ENST00000452670 400 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 RPL18AP17-201ENST00000455326 198 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AC090525.1-201ENST00000479116 478 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AL024509.2-201ENST00000493462 493 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AC026412.2-201ENST00000512270 1075 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 OR4P1P-201ENST00000530808 1136 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 EEF1B2P4-201ENST00000551398 348 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AC126177.3-201ENST00000551839 688 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 BNIP3P24-201ENST00000593398 557 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AL450336.1-201ENST00000605180 586 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AL451074.6-201ENST00000608512 729 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AP000240.1-201ENST00000609910 452 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 AL136164.4-201ENST00000625013 2135 ntBASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SMIM28A0A1B0GU29 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AL049780.3-201ENST00000624612 1583 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 RNU4-92P-201ENST00000363783 136 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 RNU6-621P-201ENST00000364752 109 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 RPL23AP29-201ENST00000397284 453 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 SSR1P2-201ENST00000415208 787 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 MTND2P5-201ENST00000432656 1006 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 FGF7P5-201ENST00000441829 291 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AP000936.2-201ENST00000447151 681 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 MTCYBP11-201ENST00000447254 1109 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC005297.2-201ENST00000450430 606 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 RPL21P134-201ENST00000453468 483 ntBASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.93□□□□□ -1.94
SMIM28A0A1B0GU29 AC092754.2-201ENST00000463506 460 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms