Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC116347.2-201ENST00000514912 523 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORA64.4-201ENST00000516632 81 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC025881.1-201ENST00000518851 512 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC103783.1-201ENST00000520506 373 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC060788.1-201ENST00000521318 469 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC007224.1-201ENST00000564410 144 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MIR4700-201ENST00000578311 74 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC006116.10-201ENST00000591836 581 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL391497.1-201ENST00000608671 547 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC093783.1-201ENST00000612976 329 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MIR8058-201ENST00000615737 89 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC104010.1-201ENST00000616889 150 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC012150.2-201ENST00000621300 544 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 Z69908.1-201ENST00000622603 247 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC079597.1-201ENST00000624306 508 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TAB3P1-202ENST00000452645 1634 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC017071.1-201ENST00000564407 2204 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 Y_RNA.77-201ENST00000362962 107 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNA5SP197-201ENST00000363357 119 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORD56.3-201ENST00000363507 71 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-1078P-201ENST00000364522 103 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 HSPE1P26-201ENST00000405341 275 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU2-43P-201ENST00000410306 190 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MTND1P21-201ENST00000412991 285 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RPL17P12-201ENST00000413391 526 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL035423.1-201ENST00000420331 213 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RPL21P66-201ENST00000426566 466 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 BX890604.2-201ENST00000427883 474 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 VDAC1P3-201ENST00000434069 851 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 CYCSP43-201ENST00000438233 310 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 HMGB3P11-201ENST00000440127 604 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 COX6CP12-201ENST00000446748 202 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 HMGB3P8-201ENST00000449709 577 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC009961.3-201ENST00000449832 765 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RPL31P3-201ENST00000458430 332 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 snoU13.4-201ENST00000458916 104 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RN7SL132P-201ENST00000478131 296 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 KLHL2P1-201ENST00000508691 521 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC022483.1-201ENST00000514020 567 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 PARP1P2-201ENST00000556806 195 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC012414.6-201ENST00000568241 401 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MIR5697-201ENST00000578045 78 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC060771.1-201ENST00000582031 164 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TPMTP1-201ENST00000592307 737 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC022146.1-201ENST00000595307 847 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AP001429.1-201ENST00000602568 530 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL022099.1-201ENST00000604551 712 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC080013.6-201ENST00000606185 215 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL158211.4-201ENST00000606988 584 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC073114.1-201ENST00000612027 490 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC048344.4-201ENST00000619744 527 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL590240.3-201ENST00000621416 943 ntBASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TRBV4-1A0A0J9YWV2 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms