Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC163A0A0D9SF12 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 TAB3P1-202ENST00000452645 1634 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-552P-201ENST00000362869 119 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RNA5SP28-201ENST00000363841 119 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-61P-201ENST00000365528 109 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-1181P-201ENST00000384191 106 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 Y_RNA.576-201ENST00000384781 102 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RNU6-903P-201ENST00000391270 109 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RPS26P8-201ENST00000393490 348 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 EEF1A1P40-201ENST00000412883 573 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 MTCO1P39-201ENST00000426148 480 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RPS12P10-201ENST00000427031 377 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RPS29P17-201ENST00000430795 166 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RPL36AP53-201ENST00000432891 316 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 RPL7AP61-201ENST00000443410 636 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AL118520.1-201ENST00000450770 291 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC079168.2-201ENST00000453977 416 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC025164.1-201ENST00000496249 478 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 SNORA31.22-201ENST00000517204 135 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 ERHP1-201ENST00000523006 310 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC024619.4-201ENST00000580924 316 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 MIR3936-201ENST00000584304 110 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC018638.8-201ENST00000588755 281 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC114781.5-201ENST00000615297 108 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AL445567.2-201ENST00000618935 498 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC112200.1-201ENST00000625015 234 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 MIR4275-201ENST00000636486 87 ntBASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC163A0A0D9SF12 MAPK10-286ENST00000641208 8747 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 SNORA31-201ENST00000362607 130 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 Y_RNA.157-201ENST00000363638 102 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 SNORD115-7-201ENST00000365306 82 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 MIR607-201ENST00000385241 96 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 RNU1-82P-201ENST00000390851 165 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AL162578.1-201ENST00000406202 378 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 RNU2-29P-201ENST00000410423 189 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 RNA5SP111-201ENST00000411386 101 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 RPL7L1P10-201ENST00000427790 463 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AC093019.1-201ENST00000443135 252 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 NEFMP1-201ENST00000443423 1006 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 SNRPFP3-201ENST00000457792 225 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AP000852.1-201ENST00000472460 573 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 RPL21P99-201ENST00000480369 423 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 RPL39P36-201ENST00000490784 156 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AC020593.1-201ENST00000507399 299 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 NARSP2-201ENST00000518524 679 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AL138976.2-201ENST00000563989 694 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 MIR4703-201ENST00000577728 79 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AP001330.4-201ENST00000604350 154 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AC091979.2-201ENST00000607514 214 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 ZYXP1-201ENST00000617638 118 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AP003122.6-201ENST00000623831 495 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 AL450345.1-202ENST00000605741 3881 ntBASIC4.68□□□□□ -1.66
CCDC163A0A0D9SF12 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms