Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 SDR42E1P2-201ENST00000614861 481 ntBASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 Y_RNA.804-201ENST00000615262 101 ntBASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC006504.8-201ENST00000621046 635 ntBASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 AP003122.6-201ENST00000623831 495 ntBASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 U6.114-201ENST00000636407 96 ntBASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC139769.1-204ENST00000472297 1931 ntBASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC027290.2-201ENST00000623210 18662 ntBASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 AC139713.2-214ENST00000642059 1811 ntBASIC3.28□□□□□ -1.88
IGHV4-28A0A0C4DH34 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
IGHV4-28A0A0C4DH34 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
IGHV4-28A0A0C4DH34 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 ASNSP3-201ENST00000451989 1306 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC092326.2-201ENST00000624772 1561 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC067945.1-201ENST00000342609 618 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU6-946P-201ENST00000383878 107 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 UBE2V1P2-201ENST00000397758 440 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNA5SP118-201ENST00000410385 109 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL732292.1-201ENST00000426692 226 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 C4BPAP2-201ENST00000428434 478 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 RPL36AP6-201ENST00000435770 321 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 USP9YP7-201ENST00000436723 430 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC098614.3-201ENST00000438957 440 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL162388.1-201ENST00000450912 352 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 USP9YP32-201ENST00000452432 430 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 snoU13.24-201ENST00000458998 104 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC041039.1-201ENST00000485656 536 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 NIP7P2-201ENST00000485801 544 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 MTCO2P30-201ENST00000503662 364 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC139783.2-201ENST00000504847 1145 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC004062.1-201ENST00000509926 645 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC108078.2-201ENST00000510750 236 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 SNORD60.2-201ENST00000516883 86 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 ERHP1-201ENST00000523006 310 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AP005435.4-201ENST00000529514 284 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC005951.2-201ENST00000576282 495 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC009994.1-201ENST00000606889 253 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC010133.1-201ENST00000615809 842 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC104260.1-201ENST00000616660 539 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC068831.8-201ENST00000620171 435 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC011155.2-201ENST00000623202 216 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 MIR4275-201ENST00000636486 87 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC116667.1-201ENST00000604855 2072 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AL354685.2-201ENST00000448218 1447 ntBASIC3.27□□□□□ -1.89
IGHV4-28A0A0C4DH34 AC125257.1-201ENST00000560400 2930 ntBASIC3.26□□□□□ -1.89
IGHV4-28A0A0C4DH34 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
IGHV4-28A0A0C4DH34 MTND4P12-201ENST00000498999 1377 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms