Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 RPS15AP17-201ENST00000470598 390 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 NCOR1P1-202ENST00000486162 291 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC078817.1-201ENST00000492623 435 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 OR4P1P-201ENST00000530808 1136 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 SLC2A13P1-201ENST00000531560 322 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC087481.2-201ENST00000565492 330 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AL158211.1-201ENST00000566763 763 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC006270.3-201ENST00000605967 1036 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC007349.4-201ENST00000608114 532 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC006329.2-201ENST00000611491 394 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC011330.2-201ENST00000621680 635 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 PLCE1P1-201ENST00000622094 305 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC091925.2-201ENST00000625059 256 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AC138915.3-201ENST00000562908 1389 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 AP000776.1-201ENST00000530032 1663 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 SAGE4P-201ENST00000442271 3381 ntBASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.3□□□□□ -2.04
TRAV40A0A0B4J280 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC062016.1-201ENST00000355719 319 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 RNA5SP258-201ENST00000362750 119 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 MIR512-1-201ENST00000384913 84 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 RSL24D1P4-201ENST00000400938 484 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 NUP35P1-201ENST00000422734 947 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC019097.1-201ENST00000424783 735 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 ARL5AP4-201ENST00000430731 512 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 RPS25P9-201ENST00000435591 252 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 YWHAZP7-201ENST00000436906 631 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AL117351.1-201ENST00000438864 766 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AL034418.1-201ENST00000448675 860 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 RPL7P5-201ENST00000471472 736 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 KC877373.1-201ENST00000479066 408 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 RPL23AP55-201ENST00000498163 452 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC079395.1-201ENST00000510981 262 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC093677.1-201ENST00000514414 678 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 MTCO1P30-201ENST00000515244 580 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 RN7SKP43-201ENST00000516173 320 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC103783.1-201ENST00000520506 373 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC079600.2-201ENST00000550076 130 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC061975.8-201ENST00000587058 721 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC245036.5-201ENST00000596330 847 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 SNRPGP15-201ENST00000600149 222 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AL390838.2-201ENST00000602394 274 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC012119.1-201ENST00000603184 222 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC021749.1-201ENST00000604322 607 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AL158042.1-201ENST00000605338 460 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 RNA5SP108-201ENST00000605921 117 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AC138649.5-201ENST00000637456 137 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 MTND2P41-201ENST00000637599 773 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 AP001148.1-201ENST00000624124 2359 ntBASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRAV40A0A0B4J280 DBF4P1-201ENST00000412976 1892 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 NUP58P1-201ENST00000502546 1738 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 CDR1-202ENST00000625883 1485 ntBASIC2.28□□□□□ -2.04
TRAV40A0A0B4J280 AC021755.1-201ENST00000559747 1447 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms