Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 Y_RNA.408-201ENST00000383987 102 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AL031679.1-201ENST00000400616 525 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 HMGB1P17-201ENST00000403495 628 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC068533.2-201ENST00000411872 306 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AL024507.1-201ENST00000412741 274 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC092427.1-202ENST00000430569 476 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 OR4K11P-201ENST00000431829 904 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 HMGN2P31-201ENST00000432430 273 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 DDX3P2-201ENST00000446138 111 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 RPL23AP20-201ENST00000447965 421 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 RPL21P10-201ENST00000463521 490 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 RN7SL542P-201ENST00000467147 294 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC092902.1-201ENST00000486999 259 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 RPL21P13-201ENST00000488305 481 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AP002748.2-201ENST00000528671 348 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 NCAPGP2-201ENST00000557911 754 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC103810.1-201ENST00000579873 453 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AL158211.4-201ENST00000606988 584 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC004696.1-201ENST00000614345 607 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC002550.2-201ENST00000621246 394 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC039056.2-201ENST00000622261 511 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC103798.2-201ENST00000624292 632 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC012442.3-202ENST00000636742 206 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 AC080100.1-201ENST00000624239 5356 ntBASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV8-4A0A0B4J246 CR848007.1-201ENST00000442354 1699 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 RNU5E-8P-201ENST00000363502 116 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 Y_RNA.234-201ENST00000364409 97 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 RNU6-343P-201ENST00000364709 104 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 MIR449B-201ENST00000384995 97 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AC019070.1-201ENST00000415008 1024 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 RPF2P1-201ENST00000424137 906 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 GTF2IP20-201ENST00000431663 360 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 RPL27AP5-201ENST00000469428 449 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 RPL23AP11-201ENST00000475260 469 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AP004217.1-201ENST00000480579 346 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 MRPS36P2-201ENST00000512569 299 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 RN7SKP157-201ENST00000516174 282 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 RNA5SP76-201ENST00000516277 87 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 DUXAP2-201ENST00000519198 589 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 GLYCAM1-201ENST00000546596 285 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AC008739.3-201ENST00000603262 127 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AC011451.2-201ENST00000604303 598 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AC103710.4-201ENST00000609301 899 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AC124016.2-201ENST00000610058 665 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AL603758.1-201ENST00000618654 241 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AP003485.1-201ENST00000625093 753 ntBASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.18□□□□□ -2.06
TRAV8-4A0A0B4J246 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV8-4A0A0B4J246 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV8-4A0A0B4J246 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV8-4A0A0B4J246 RPL23AP57-201ENST00000332361 466 ntBASIC2.17□□□□□ -2.06
TRAV8-4A0A0B4J246 VTRNA1-1-201ENST00000363120 99 ntBASIC2.17□□□□□ -2.06
TRAV8-4A0A0B4J246 RNU1-33P-201ENST00000364249 162 ntBASIC2.17□□□□□ -2.06
TRAV8-4A0A0B4J246 snoZ40.1-201ENST00000364540 72 ntBASIC2.17□□□□□ -2.06
TRAV8-4A0A0B4J246 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV8-4A0A0B4J246 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV8-4A0A0B4J246 Y_RNA.578-201ENST00000390903 88 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms