Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 ANKRD36P1-201ENST00000344424 659 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 U3.12-201ENST00000364498 214 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 RNU6-1074P-201ENST00000383995 104 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 RPS4XP8-201ENST00000402039 771 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AL356057.1-202ENST00000402263 756 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AL356320.2-201ENST00000417263 507 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AL137014.1-201ENST00000420490 1226 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC234781.2-201ENST00000426370 994 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 MTND2P21-201ENST00000436242 1042 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC010099.1-201ENST00000455434 375 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 BX248409.1-201ENST00000455497 255 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 snoU109.4-201ENST00000458953 143 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC135721.1-201ENST00000497954 479 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 HMGB3P3-201ENST00000510526 400 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 RAC1P5-201ENST00000512182 576 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 MTCO1P47-201ENST00000523889 1271 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 MTCYBP20-201ENST00000524239 1129 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 OR10V3P-201ENST00000525712 725 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC126177.3-201ENST00000551839 688 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 VN1R88P-201ENST00000596787 292 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 NRBF2P5-201ENST00000603087 788 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC106900.2-201ENST00000604994 317 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC009159.1-201ENST00000618386 642 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC090617.9-201ENST00000623751 147 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC110079.1-202ENST00000635213 138 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 AC008669.1-201ENST00000565823 2178 ntBASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV3A0A0B4J244 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 RNA5SP289-201ENST00000362332 137 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 SNORA67.1-201ENST00000364749 141 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 MIR627-201ENST00000384979 97 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 HMGB1P11-201ENST00000413899 637 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AL365496.1-201ENST00000426885 215 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AL590762.3-201ENST00000436372 640 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 DNAJC19P8-201ENST00000452887 259 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 GTF2IP9-201ENST00000502460 301 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AC008716.1-201ENST00000511084 513 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 RNA5SP281-201ENST00000516504 135 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 RN7SKP40-201ENST00000517211 242 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 RNU1-104P-201ENST00000517280 175 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 FAM60BP-201ENST00000578364 658 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 DNAJC19P3-201ENST00000594491 331 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AC008739.2-201ENST00000597006 317 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AL390838.2-201ENST00000602394 274 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 BX322635.1-201ENST00000605804 496 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AC106028.5-201ENST00000610332 395 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AC006329.2-201ENST00000611491 394 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 BX649567.1-201ENST00000642071 1134 ntBASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.79□□□□□ -2.12
TRAV3A0A0B4J244 AC135776.4-201ENST00000624300 1904 ntBASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 AC012321.1-201ENST00000561622 1588 ntBASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 MIR221-201ENST00000385135 110 ntBASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 U3.29-201ENST00000391296 212 ntBASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 AC107081.1-201ENST00000414975 361 ntBASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 AC233981.1-201ENST00000423224 461 ntBASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 RPP40P1-201ENST00000426762 456 ntBASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.78□□□□□ -2.12
TRAV3A0A0B4J244 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms