Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 RNU6-152P-201ENST00000384037 107 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 RNU6-339P-201ENST00000384310 107 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 HMGB3P2-201ENST00000411913 584 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 MORF4L1P6-201ENST00000418771 268 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC006548.1-201ENST00000427470 102 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC004865.1-201ENST00000442276 1003 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC233982.1-201ENST00000451247 436 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC104090.1-201ENST00000506341 1171 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 C1DP5-201ENST00000525775 383 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC092470.1-201ENST00000546187 132 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC074029.2-201ENST00000551045 634 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC121758.2-201ENST00000553271 193 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AP005205.1-201ENST00000563503 508 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 MIR4658-201ENST00000584344 65 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 MTCO3P22-201ENST00000603219 784 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC128687.1-201ENST00000605304 619 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AC120053.1-201ENST00000607706 736 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AL391597.1-201ENST00000618707 694 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 AL162233.1-201ENST00000620014 944 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 CR381572.1-201ENST00000625098 102 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 IGHVIII-44-202ENST00000636235 289 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 BX649567.1-201ENST00000642071 1134 ntBASIC1.84□□□□□ -2.11
TRAV27A0A087WT01 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.84□□□□□ -2.12
TRAV27A0A087WT01 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 ANKRD36P1-201ENST00000344424 659 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 RNU6-525P-201ENST00000363685 104 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 RNU1-52P-201ENST00000384190 164 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 RNU6-301P-201ENST00000384277 107 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 MIR524-201ENST00000385242 87 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 LINC01347-201ENST00000417964 355 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 TMEM167AP1-201ENST00000423409 219 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 AL121871.1-201ENST00000443413 436 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 SNRPGP16-201ENST00000533275 226 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 SNORD53-201ENST00000579969 78 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 OR1M4P-201ENST00000589199 287 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 Y_RNA.783-201ENST00000613546 102 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 AL356266.1-201ENST00000623311 483 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 AC008669.1-201ENST00000565823 2178 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 MTND4P35-201ENST00000604257 1375 ntBASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
TRAV27A0A087WT01 RNU4-82P-201ENST00000362443 140 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 RNU6-1226P-201ENST00000384317 107 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 SSXP10-201ENST00000402595 565 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 RN7SKP32-201ENST00000410167 303 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AC010099.1-201ENST00000455434 375 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AC096751.1-202ENST00000502691 1067 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 IGKV3-31-201ENST00000523109 329 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AL512310.1-201ENST00000548639 172 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AC009063.1-201ENST00000563342 702 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AMZ2P1-203ENST00000565833 850 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 MIMT1-201ENST00000597105 1050 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AC025588.3-201ENST00000604182 274 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AC106900.2-201ENST00000604994 317 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AC013468.1-201ENST00000608680 598 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AC079597.1-201ENST00000624306 508 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 U6.107-201ENST00000637108 79 ntBASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
TRAV27A0A087WT01 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV27A0A087WT01 RNU5D-1-201ENST00000363299 116 ntBASIC1.81□□□□□ -2.12
TRAV27A0A087WT01 SNORA67.3-201ENST00000384366 140 ntBASIC1.81□□□□□ -2.12
TRAV27A0A087WT01 SNORA64-201ENST00000384674 134 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms