Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 FGF7P2-201ENST00000332473 296 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 RNA5SP42-201ENST00000364278 115 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AL024474.1-201ENST00000404655 591 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 RN7SKP266-201ENST00000410232 287 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC245052.5-201ENST00000416320 649 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 MTCO1P21-201ENST00000416634 589 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 RPS27AP14-201ENST00000422868 454 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 MRPS18BP2-201ENST00000434310 759 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC092641.1-201ENST00000440229 772 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 GDI2P2-201ENST00000445131 608 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 MTCO3P20-201ENST00000454926 688 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AP000797.1-201ENST00000478870 387 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 MTCYBP41-201ENST00000528913 1123 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AL139174.1-201ENST00000531489 886 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 ZNF415P1-201ENST00000582279 1166 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 MIR544B-201ENST00000582372 78 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 OR4G1P-201ENST00000588632 938 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC083760.1-201ENST00000589621 670 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AL136363.2-201ENST00000604173 851 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 AC103710.4-201ENST00000609301 899 ntBASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.79□□□□□ -1.8
SNX9Q9Y5X1 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 RPL23AP57-201ENST00000332361 466 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 FRG1CP-201ENST00000358464 769 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 RNU6-289P-201ENST00000364093 107 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 RNU6-348P-201ENST00000384386 107 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 U3.39-201ENST00000408569 239 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 RNU2-16P-201ENST00000410712 136 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 RN7SKP53-201ENST00000411337 315 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC068533.1-201ENST00000418542 415 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 BX842559.1-201ENST00000419615 532 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 ATP5JP1-201ENST00000431631 322 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 RPL37P21-201ENST00000435890 276 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 SKP1P1-201ENST00000438081 489 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 MUPP-201ENST00000438111 566 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AL831737.1-201ENST00000441288 271 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 CFTRP1-201ENST00000456646 183 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC084357.1-201ENST00000473404 255 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC025518.1-201ENST00000479856 347 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 RN7SL293P-201ENST00000481765 281 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 ARL2BPP4-201ENST00000506854 471 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC010625.1-201ENST00000511296 403 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 RNU6-720P-201ENST00000516363 108 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 DUXAP2-201ENST00000519198 589 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 COX6CP8-201ENST00000522620 226 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 MTCYBP20-201ENST00000524239 1129 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AP004247.1-201ENST00000531556 1289 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC092470.1-201ENST00000546187 132 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 MIR4307-201ENST00000582802 84 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC087683.1-201ENST00000591187 441 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AL021997.1-201ENST00000605757 193 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 Z99129.1-201ENST00000612510 255 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC027807.2-201ENST00000616099 408 ntBASIC3.78□□□□□ -1.8
SNX9Q9Y5X1 AC104010.1-201ENST00000616889 150 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms