Protein–RNA interactions for Protein: Q9Y5T5

USP16, Ubiquitin carboxyl-terminal hydrolase 16, humanhuman

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP16Q9Y5T5 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.26□□□□□ -1.89
USP16Q9Y5T5 AL590639.1-201ENST00000456484 337 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 TRBV26-201ENST00000456572 344 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 RPL9P33-201ENST00000484311 566 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP16Q9Y5T5 HMGB3P15-201ENST00000507326 574 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.26□□□□□ -1.89
USP16Q9Y5T5 IGKV2D-36-201ENST00000518643 226 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.26□□□□□ -1.89
USP16Q9Y5T5 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.26□□□□□ -1.89
USP16Q9Y5T5 MAGOH2P-202ENST00000584384 429 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 AL139022.2-201ENST00000606934 443 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP16Q9Y5T5 U4.3-201ENST00000621047 82 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 AC025034.2-201ENST00000623264 286 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 AC103798.2-201ENST00000624292 632 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 OR1S1-201ENST00000624470 978 ntBASIC3.26□□□□□ -1.89
USP16Q9Y5T5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
USP16Q9Y5T5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
USP16Q9Y5T5 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.26□□□□□ -1.89
USP16Q9Y5T5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 RNU6-1066P-201ENST00000363573 105 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 SNORD116-23-201ENST00000384645 92 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AL079342.2-201ENST00000403367 482 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 SNORD88.1-201ENST00000408684 91 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AL133384.1-201ENST00000412744 351 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC244098.2-201ENST00000422068 99 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC241584.1-201ENST00000438469 1241 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 RPL23AP16-201ENST00000441715 421 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC004022.1-201ENST00000447766 1066 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AL034418.1-201ENST00000448675 860 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 KLRA1P-201ENST00000503499 986 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 RNA5SP24-201ENST00000516478 95 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 RNU6-885P-201ENST00000516607 104 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 ZNF705CP-201ENST00000530515 889 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC107954.1-201ENST00000565906 727 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC010620.2-201ENST00000600135 313 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AL022067.1-201ENST00000602426 454 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AL606834.3-201ENST00000602615 496 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 GAS5-AS1-201ENST00000602767 694 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AL355812.1-201ENST00000603215 216 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AL158050.2-201ENST00000605336 568 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC016877.3-201ENST00000606778 504 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AL157770.1-201ENST00000623049 439 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC098679.5-201ENST00000624394 571 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 AC026634.1-201ENST00000634369 198 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 ZNF663P-202ENST00000641770 1131 ntBASIC3.25□□□□□ -1.89
USP16Q9Y5T5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
USP16Q9Y5T5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 RNU6-600P-201ENST00000362524 99 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 RNU6-263P-201ENST00000363811 107 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 SNORD114-30-201ENST00000364448 72 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 RNU6-335P-201ENST00000364563 113 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 RNU6-224P-201ENST00000384055 107 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 SNORA70B-201ENST00000384210 135 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 Y_RNA.493-201ENST00000384422 102 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 MT-TC-201ENST00000387405 66 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AL121972.1-201ENST00000402023 252 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AL133264.1-201ENST00000407157 562 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AL354692.1-201ENST00000423044 315 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 RPL36AP33-201ENST00000450395 310 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AC010301.1-201ENST00000473936 355 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 RPL23AP55-201ENST00000498163 452 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 RNU6-276P-201ENST00000516114 96 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 MTCYBP41-201ENST00000528913 1123 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AP003385.6-201ENST00000531603 374 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AL355836.1-201ENST00000555951 870 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AC023043.3-201ENST00000593113 385 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 AC025588.3-201ENST00000604182 274 ntBASIC3.24□□□□□ -1.89
USP16Q9Y5T5 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP16Q9Y5T5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
USP16Q9Y5T5 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms