Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 AL139156.1-201ENST00000412785 841 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 AL353621.1-201ENST00000418219 243 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 PPP1R11P2-201ENST00000423543 382 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 OR4C10P-201ENST00000434991 931 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 AC090774.1-201ENST00000435925 246 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 USP9YP7-201ENST00000436723 430 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 USP9YP32-201ENST00000452432 430 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 RN7SL352P-201ENST00000466002 277 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 AC087190.1-201ENST00000484462 480 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 AC107032.1-201ENST00000485945 480 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 RPS23P5-201ENST00000495419 428 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 GMPSP1-201ENST00000514075 579 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 RNU6-143P-201ENST00000516942 93 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 BDH2P1-201ENST00000602288 736 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 AC138965.3-201ENST00000623875 498 ntBASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.4□□□□□ -1.54
HRH3Q9Y5N1 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.4□□□□□ -1.55
HRH3Q9Y5N1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.4□□□□□ -1.55
HRH3Q9Y5N1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HRH3Q9Y5N1 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
HRH3Q9Y5N1 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HRH3Q9Y5N1 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.55
HRH3Q9Y5N1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
HRH3Q9Y5N1 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
HRH3Q9Y5N1 AC022164.1-201ENST00000568767 2673 ntBASIC5.4□□□□□ -1.55
HRH3Q9Y5N1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 BCORP1-203ENST00000513194 5093 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 MIR215-201ENST00000384858 110 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 U3.35-201ENST00000408405 208 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 U3.42-201ENST00000408746 214 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 RNA5SP56-201ENST00000410277 118 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 GAPDHP48-201ENST00000436626 961 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AC004938.1-201ENST00000438468 308 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AL136097.1-201ENST00000456945 913 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AL122020.1-201ENST00000472287 459 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AC074250.1-201ENST00000511117 192 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AC067942.3-201ENST00000512025 362 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 RNU6-1095P-201ENST00000516148 108 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 RNU6-1212P-201ENST00000517023 104 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AC022790.1-201ENST00000522872 204 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 COX6CP7-201ENST00000597056 208 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AL136131.3-201ENST00000607600 188 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AC004852.3-201ENST00000614131 326 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 OR13C1P-202ENST00000641378 2919 ntBASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.39□□□□□ -1.55
HRH3Q9Y5N1 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 PHKBP1-201ENST00000450951 1951 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 RNU6-1317P-201ENST00000364582 104 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 RNA5SP240-201ENST00000365355 128 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 Y_RNA.458-201ENST00000384240 102 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 SNORD115-46-201ENST00000390982 71 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 PCNPP3-201ENST00000393579 471 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 MRPL53P1-201ENST00000414323 319 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 EI24P1-201ENST00000416584 867 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 GNG5P5-201ENST00000420444 220 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 AC099677.3-201ENST00000427081 395 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 AL663074.2-201ENST00000440621 479 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 TPT1P13-201ENST00000449760 499 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 AC004129.2-201ENST00000457229 287 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 RPS26P39-201ENST00000469206 341 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 AC012158.1-204ENST00000483430 465 ntBASIC5.38□□□□□ -1.55
HRH3Q9Y5N1 RPL23AP40-201ENST00000487630 390 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms