Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 DBIP2-201ENST00000419076 262 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AL591719.1-201ENST00000444669 744 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 RAC1P7-201ENST00000445367 377 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 MTCO3P20-201ENST00000454926 688 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 ANKRD26P4-201ENST00000455755 950 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 RPL27AP5-201ENST00000469428 449 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 RPL31P50-201ENST00000471002 296 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AC104563.1-201ENST00000476147 376 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 SNORA31.1-201ENST00000515993 133 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 SNORA31.5-201ENST00000516190 133 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 RN7SKP209-201ENST00000516888 304 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 FAM60DP-201ENST00000524174 632 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 UBE2NP1-201ENST00000545592 458 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AL354943.1-201ENST00000572103 781 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 MTATP6P24-201ENST00000576835 677 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AL390208.1-201ENST00000605885 644 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 TUSC7.1-201ENST00000610969 165 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 MIR6130-201ENST00000619419 109 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AL353743.1-202ENST00000431724 1695 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 ZNF542P-204ENST00000482727 1305 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 AC006504.1-201ENST00000562493 3666 ntBASIC3.38□□□□□ -1.87
PCDHGA1Q9Y5H4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC009812.4-201ENST00000569134 1805 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC005832.2-201ENST00000538921 1430 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC008568.2-201ENST00000623862 2313 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC103988.1-201ENST00000566382 2177 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 MIR135A2-201ENST00000384854 100 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 RNU1-101P-201ENST00000391171 127 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 RSL24D1P4-201ENST00000400938 484 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 SKINT1L-201ENST00000401057 817 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 MTATP6P4-201ENST00000427725 675 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 ZYG11AP1-201ENST00000430329 837 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 RSL24D1P3-201ENST00000449255 495 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 MTND1P9-201ENST00000453775 944 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 RNA5SP310-201ENST00000459084 116 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 S100A11P2-201ENST00000467589 312 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 MTND2P14-201ENST00000482139 351 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 TXNP6-201ENST00000510190 310 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 FCF1P8-201ENST00000510322 597 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC112673.1-201ENST00000513168 575 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 IGKV2-26-201ENST00000518305 343 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC023161.2-201ENST00000551218 780 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC006557.5-201ENST00000603126 811 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AL137843.1-201ENST00000605078 385 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC063944.3-201ENST00000609969 533 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AL139418.1-201ENST00000613613 177 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC021755.4-201ENST00000616620 456 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 U4.6-201ENST00000621618 127 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 MIR6852-201ENST00000621699 66 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AL445264.1-201ENST00000621719 171 ntBASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA1Q9Y5H4 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AL022578.1-201ENST00000439330 1433 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AL161781.1-201ENST00000354277 403 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 RNU6-1214P-201ENST00000363650 109 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 RNU6-931P-201ENST00000363850 107 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 RNU6-359P-201ENST00000365466 108 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 RPL7P46-201ENST00000425129 740 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 TXNL1P1-201ENST00000429528 554 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AL356867.1-201ENST00000429623 299 ntBASIC3.36□□□□□ -1.87
PCDHGA1Q9Y5H4 AC024082.2-201ENST00000434771 238 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms